Gene Mrub_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0416 
Symbol 
ID8878489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp393643 
End bp394725 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID 
ProductTRAP dicarboxylate transporter subunit DctP 
Protein accessionYP_003506213 
Protein GI291294815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.42775e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAC GTGACTTCTT GAAGAAGGCG GGGGTCGGTG CCGTAGCGGC GAGCACCGTG 
TTTGGCCCGG TCTATGCCCA GACCCTGCCG CGTTTGCGCT GGCGTATGGC CACGAGCTGG
CCCCGCTCGC TGGATACCCT GTTTGGCGCT GCCGAGATTG TGGCCAGGCG GGTGGCCGAG
ATGACCGATG GCCGGTTCGA GATCACCCCC TATCCGGCGG GTGAGATTGC TCCCGGGCTG
CAGGTGCTGG ATGTGGTGCA GGCCGGCAAC GTTGAGATGG GCCATACGGC TAACTATTAC
TACGTGGGCA AAAGCCCCTC GCTGGCCTTC GATACCGGGG TACCCTTTGG CCTGAACCCT
CGCCAGCAAA ACGCCTGGCT CTACTTTGGC GGTGGGTTGC AGGCCATGCA GCGGGTGGCC
GCCGACTTCA ACGTCATCAC CTTCCCGGCA GGTAACACCG GGGTGCAGAT GGGCGGCTGG
TTCCGCAGGG AAATCCGGGG CCCTGAAGAC CTCAGGGGGC TGCGCTTCCG CATTCCAGGC
CTAGGGGGGC AGGTTATGGC CCGCCTGGGG GTTACGGTGC AAACCCTGGC GGCTGGGGAG
ATCTTCCTGG CGCTCGACCG TGGCGCTATC GACGCAGCCG AGTTTGTAGG CCCCTACGAT
GACGAAAAAC TCGGTCTGAA CAAGGCGGCC CGCTTCTACT ACTACCCCGG CTGGTGGGAA
CCCGGTTCGA CAGTTTCCAC TCTGATCAAC CTCGAGCGCT GGCGCAGCCT GCCCAAGGAG
TACCAGGAGA TTGTCAAGGC GGCCTGCGCC GAGGCCAACG ATCGAACCAT AGCCGAATAC
GATGCCAAAA ACGCCCCGGC GCTGGCCCGG TTGCAGCGGG CTGGCACCCA GCTTAGACCC
TATCCTTCCA GCGTGCTGCA GGCGGCCAAC AGAGAGGCCA CCGCTTTGTA CGAAGAAATT
GCCGCCAAAG ATACCACCTA CCGTGGCATC TACGAGAACT GGAAGAAATT CCGCGACGAG
TCCCGCCGCT GGTTTGCGCT TAACGAGTTC CGCTACGATG ATTTTGTCCG CACCTTGCGG
TAA
 
Protein sequence
MKRRDFLKKA GVGAVAASTV FGPVYAQTLP RLRWRMATSW PRSLDTLFGA AEIVARRVAE 
MTDGRFEITP YPAGEIAPGL QVLDVVQAGN VEMGHTANYY YVGKSPSLAF DTGVPFGLNP
RQQNAWLYFG GGLQAMQRVA ADFNVITFPA GNTGVQMGGW FRREIRGPED LRGLRFRIPG
LGGQVMARLG VTVQTLAAGE IFLALDRGAI DAAEFVGPYD DEKLGLNKAA RFYYYPGWWE
PGSTVSTLIN LERWRSLPKE YQEIVKAACA EANDRTIAEY DAKNAPALAR LQRAGTQLRP
YPSSVLQAAN REATALYEEI AAKDTTYRGI YENWKKFRDE SRRWFALNEF RYDDFVRTLR