Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0416 |
Symbol | |
ID | 8878489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 393643 |
End bp | 394725 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | TRAP dicarboxylate transporter subunit DctP |
Protein accession | YP_003506213 |
Protein GI | 291294815 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000442775 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGAC GTGACTTCTT GAAGAAGGCG GGGGTCGGTG CCGTAGCGGC GAGCACCGTG TTTGGCCCGG TCTATGCCCA GACCCTGCCG CGTTTGCGCT GGCGTATGGC CACGAGCTGG CCCCGCTCGC TGGATACCCT GTTTGGCGCT GCCGAGATTG TGGCCAGGCG GGTGGCCGAG ATGACCGATG GCCGGTTCGA GATCACCCCC TATCCGGCGG GTGAGATTGC TCCCGGGCTG CAGGTGCTGG ATGTGGTGCA GGCCGGCAAC GTTGAGATGG GCCATACGGC TAACTATTAC TACGTGGGCA AAAGCCCCTC GCTGGCCTTC GATACCGGGG TACCCTTTGG CCTGAACCCT CGCCAGCAAA ACGCCTGGCT CTACTTTGGC GGTGGGTTGC AGGCCATGCA GCGGGTGGCC GCCGACTTCA ACGTCATCAC CTTCCCGGCA GGTAACACCG GGGTGCAGAT GGGCGGCTGG TTCCGCAGGG AAATCCGGGG CCCTGAAGAC CTCAGGGGGC TGCGCTTCCG CATTCCAGGC CTAGGGGGGC AGGTTATGGC CCGCCTGGGG GTTACGGTGC AAACCCTGGC GGCTGGGGAG ATCTTCCTGG CGCTCGACCG TGGCGCTATC GACGCAGCCG AGTTTGTAGG CCCCTACGAT GACGAAAAAC TCGGTCTGAA CAAGGCGGCC CGCTTCTACT ACTACCCCGG CTGGTGGGAA CCCGGTTCGA CAGTTTCCAC TCTGATCAAC CTCGAGCGCT GGCGCAGCCT GCCCAAGGAG TACCAGGAGA TTGTCAAGGC GGCCTGCGCC GAGGCCAACG ATCGAACCAT AGCCGAATAC GATGCCAAAA ACGCCCCGGC GCTGGCCCGG TTGCAGCGGG CTGGCACCCA GCTTAGACCC TATCCTTCCA GCGTGCTGCA GGCGGCCAAC AGAGAGGCCA CCGCTTTGTA CGAAGAAATT GCCGCCAAAG ATACCACCTA CCGTGGCATC TACGAGAACT GGAAGAAATT CCGCGACGAG TCCCGCCGCT GGTTTGCGCT TAACGAGTTC CGCTACGATG ATTTTGTCCG CACCTTGCGG TAA
|
Protein sequence | MKRRDFLKKA GVGAVAASTV FGPVYAQTLP RLRWRMATSW PRSLDTLFGA AEIVARRVAE MTDGRFEITP YPAGEIAPGL QVLDVVQAGN VEMGHTANYY YVGKSPSLAF DTGVPFGLNP RQQNAWLYFG GGLQAMQRVA ADFNVITFPA GNTGVQMGGW FRREIRGPED LRGLRFRIPG LGGQVMARLG VTVQTLAAGE IFLALDRGAI DAAEFVGPYD DEKLGLNKAA RFYYYPGWWE PGSTVSTLIN LERWRSLPKE YQEIVKAACA EANDRTIAEY DAKNAPALAR LQRAGTQLRP YPSSVLQAAN REATALYEEI AAKDTTYRGI YENWKKFRDE SRRWFALNEF RYDDFVRTLR
|
| |