Gene Mrub_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0289 
Symbol 
ID8878359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp254728 
End bp256326 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content66% 
IMG OID 
Productxylan 1,4-beta-xylosidase 
Protein accessionYP_003506087 
Protein GI291294689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.1727e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.556687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGA TCCTCAACCC CATCCTGCGG GGCTTCCACC CCGACCCCTC CATCCTGCGG 
GTGGGGGACG ACTACTTCAT CGCCACCTCC ACCTTCGAGT GGTGGCCGGG GGTGCGGCTG
CACCACTCGC GCGACCTGGT GCACTGGCGG CCCATCGGCT ACGCCCTGAC CCGCACCTCG
CAGCTCGAGA TGCTGGGCAA CCCCGACTCC GGGGGCATCT GGGCCCCCTG CCTGAGCCAC
GATGGGGCGC AGTTCTACCT CATCTACACC GACGTGAAAA CCTGGGGCAA CGGCGAGGTC
TTCAAGGATG CGCACAACTA CCTGGTAACC GCTCCAAGCA TCGAAGGCCC CTGGTCGGAG
CCGGTGTACC TCAATTCCTC GGGCTTCGAC CCCTCGCTCT TCCACGACGA GGACGGGCGC
AAATGGCTCT TGAATATGCG CTGGGATCAC CGCAAGGGCC GCAACGCCTT TGCCGGCATC
CTGCTGCAAG AGTACGACCC CCAGCAAAAG CGGCTGGTGG GGCCGGTGCA CAACATCTTC
CGGGGAACCC CCCTGGGCGT GACCGAGGGG CCGCACCTGT ACAAGAAGGA CGGCTGGTAC
TACCTGGTGG TGGCCGAAGG CGGTACGACC TATGCCCACG CGGTGACGGT GGCCCGCTCG
CAGCGCATTG AGGGGCCCTA CGAGGTGGAT CCCTGCTACC CCACCCTGAC CGCTCGAGGC
CACCCGGAAC TACCCCTGCA AAAAGCCGGC CACGCCTCGC TGGTGCAGAC CCAGCAGGGG
GAGTGGTACA TGGCCCACCT GGTCGGGCGC CCCCTCGAGC CCCCCCAGGC CCTGCGCCGC
CACTGCCCGC TGGGCCGCGA AACGGCCTTG CAAAAGATCC GCTGGAGCCC GGATGGCTGG
CCCCGGCTCT GGCACGGGAG CAATACCCCG GCCCTGGAGG TGGAAGCCCC GGCCCTTCCC
GCCCACCCCT GGCCGAAGGA ACCCGAACGC GACGACTTCG AAGCGCCAAC CCTGAGCCTC
CACTTCCAGA CCCTGCGCCA CCCCCCCGAT CCCTCCTGGC TCTCGCTCAC CGAGCGCCCC
AGCTACCTGC GCCTTTTTGG CCGGGAGTCG CTCAGTTCGC GCCACCGCCA GAGCCTGGTG
GCCCGCCGCC TGCAGCACTT TTACGCCGAG GCCGAGACGG TGCTGGAGTT CGAACCCCAG
CACTTCCAGC AGATGGCCGG GCTGGTCTGC TACTACGACA CTGGCAACTG GGTCTACCTA
CGGGTGAGCC GCGATGAAGC ACTGGGCAAA ACCCTTAGCA TCCTGACCTG TGACAACGGC
CACTACGACG AACCGCTGGA TGGGGAGCTG GGAATCGAGG GCTGGTCAAG GGTCTACCTC
AAGGTGCGAT ACCAGCGCGA TACCTTTGGC TTCGCCTACT CAGCCAATGG CCTGGACTGG
AGCGAGATTC CCCTGCGCTT CCCGGCCTAC AAACTCTCCG ACGACCACTG CCGGGGGCTG
GGCTTTACCG GTACCTTTAT CGGGCTGTGC GCGCAGGATC TGAGCGGAGC GCGCCTGCAC
GCCGATTTCG ACTACTTTGT CTACCGGGGG CTCGAGTAA
 
Protein sequence
MTRILNPILR GFHPDPSILR VGDDYFIATS TFEWWPGVRL HHSRDLVHWR PIGYALTRTS 
QLEMLGNPDS GGIWAPCLSH DGAQFYLIYT DVKTWGNGEV FKDAHNYLVT APSIEGPWSE
PVYLNSSGFD PSLFHDEDGR KWLLNMRWDH RKGRNAFAGI LLQEYDPQQK RLVGPVHNIF
RGTPLGVTEG PHLYKKDGWY YLVVAEGGTT YAHAVTVARS QRIEGPYEVD PCYPTLTARG
HPELPLQKAG HASLVQTQQG EWYMAHLVGR PLEPPQALRR HCPLGRETAL QKIRWSPDGW
PRLWHGSNTP ALEVEAPALP AHPWPKEPER DDFEAPTLSL HFQTLRHPPD PSWLSLTERP
SYLRLFGRES LSSRHRQSLV ARRLQHFYAE AETVLEFEPQ HFQQMAGLVC YYDTGNWVYL
RVSRDEALGK TLSILTCDNG HYDEPLDGEL GIEGWSRVYL KVRYQRDTFG FAYSANGLDW
SEIPLRFPAY KLSDDHCRGL GFTGTFIGLC AQDLSGARLH ADFDYFVYRG LE