Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0289 |
Symbol | |
ID | 8878359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 254728 |
End bp | 256326 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | xylan 1,4-beta-xylosidase |
Protein accession | YP_003506087 |
Protein GI | 291294689 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000021727 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.556687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGA TCCTCAACCC CATCCTGCGG GGCTTCCACC CCGACCCCTC CATCCTGCGG GTGGGGGACG ACTACTTCAT CGCCACCTCC ACCTTCGAGT GGTGGCCGGG GGTGCGGCTG CACCACTCGC GCGACCTGGT GCACTGGCGG CCCATCGGCT ACGCCCTGAC CCGCACCTCG CAGCTCGAGA TGCTGGGCAA CCCCGACTCC GGGGGCATCT GGGCCCCCTG CCTGAGCCAC GATGGGGCGC AGTTCTACCT CATCTACACC GACGTGAAAA CCTGGGGCAA CGGCGAGGTC TTCAAGGATG CGCACAACTA CCTGGTAACC GCTCCAAGCA TCGAAGGCCC CTGGTCGGAG CCGGTGTACC TCAATTCCTC GGGCTTCGAC CCCTCGCTCT TCCACGACGA GGACGGGCGC AAATGGCTCT TGAATATGCG CTGGGATCAC CGCAAGGGCC GCAACGCCTT TGCCGGCATC CTGCTGCAAG AGTACGACCC CCAGCAAAAG CGGCTGGTGG GGCCGGTGCA CAACATCTTC CGGGGAACCC CCCTGGGCGT GACCGAGGGG CCGCACCTGT ACAAGAAGGA CGGCTGGTAC TACCTGGTGG TGGCCGAAGG CGGTACGACC TATGCCCACG CGGTGACGGT GGCCCGCTCG CAGCGCATTG AGGGGCCCTA CGAGGTGGAT CCCTGCTACC CCACCCTGAC CGCTCGAGGC CACCCGGAAC TACCCCTGCA AAAAGCCGGC CACGCCTCGC TGGTGCAGAC CCAGCAGGGG GAGTGGTACA TGGCCCACCT GGTCGGGCGC CCCCTCGAGC CCCCCCAGGC CCTGCGCCGC CACTGCCCGC TGGGCCGCGA AACGGCCTTG CAAAAGATCC GCTGGAGCCC GGATGGCTGG CCCCGGCTCT GGCACGGGAG CAATACCCCG GCCCTGGAGG TGGAAGCCCC GGCCCTTCCC GCCCACCCCT GGCCGAAGGA ACCCGAACGC GACGACTTCG AAGCGCCAAC CCTGAGCCTC CACTTCCAGA CCCTGCGCCA CCCCCCCGAT CCCTCCTGGC TCTCGCTCAC CGAGCGCCCC AGCTACCTGC GCCTTTTTGG CCGGGAGTCG CTCAGTTCGC GCCACCGCCA GAGCCTGGTG GCCCGCCGCC TGCAGCACTT TTACGCCGAG GCCGAGACGG TGCTGGAGTT CGAACCCCAG CACTTCCAGC AGATGGCCGG GCTGGTCTGC TACTACGACA CTGGCAACTG GGTCTACCTA CGGGTGAGCC GCGATGAAGC ACTGGGCAAA ACCCTTAGCA TCCTGACCTG TGACAACGGC CACTACGACG AACCGCTGGA TGGGGAGCTG GGAATCGAGG GCTGGTCAAG GGTCTACCTC AAGGTGCGAT ACCAGCGCGA TACCTTTGGC TTCGCCTACT CAGCCAATGG CCTGGACTGG AGCGAGATTC CCCTGCGCTT CCCGGCCTAC AAACTCTCCG ACGACCACTG CCGGGGGCTG GGCTTTACCG GTACCTTTAT CGGGCTGTGC GCGCAGGATC TGAGCGGAGC GCGCCTGCAC GCCGATTTCG ACTACTTTGT CTACCGGGGG CTCGAGTAA
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Protein sequence | MTRILNPILR GFHPDPSILR VGDDYFIATS TFEWWPGVRL HHSRDLVHWR PIGYALTRTS QLEMLGNPDS GGIWAPCLSH DGAQFYLIYT DVKTWGNGEV FKDAHNYLVT APSIEGPWSE PVYLNSSGFD PSLFHDEDGR KWLLNMRWDH RKGRNAFAGI LLQEYDPQQK RLVGPVHNIF RGTPLGVTEG PHLYKKDGWY YLVVAEGGTT YAHAVTVARS QRIEGPYEVD PCYPTLTARG HPELPLQKAG HASLVQTQQG EWYMAHLVGR PLEPPQALRR HCPLGRETAL QKIRWSPDGW PRLWHGSNTP ALEVEAPALP AHPWPKEPER DDFEAPTLSL HFQTLRHPPD PSWLSLTERP SYLRLFGRES LSSRHRQSLV ARRLQHFYAE AETVLEFEPQ HFQQMAGLVC YYDTGNWVYL RVSRDEALGK TLSILTCDNG HYDEPLDGEL GIEGWSRVYL KVRYQRDTFG FAYSANGLDW SEIPLRFPAY KLSDDHCRGL GFTGTFIGLC AQDLSGARLH ADFDYFVYRG LE
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