Gene Mrub_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0287 
Symbol 
ID8878357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp252387 
End bp253388 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID 
ProductEndo-1,4-beta-xylanase 
Protein accessionYP_003506085 
Protein GI291294687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.8358e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.661075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTAA CTCGCTGGAC TTTCGTGGGG GTTTGCTTGG GACTGATGGT ATGGGCCCAG 
CCCGGCCCGC CGCTGCGAAG CCTGGCCGAG GCTCGGAAAA TTCAGATCGG AGCGGCTGTG
GAACCGAGTC TGCTGCTGCA GGAACCCCAG TACGCCCAGG TGCTGGCTCG GGAGTTCAAC
CTGGTGGTGG CCGAGAACGT GATGAAGTGG GGGGCCTTGC AGACCGCTCG AGGTGAGTAC
AACTTTGCCG CTGCCGACCT GCTTCTGAAC TTTGCCCAGA GGAACCGGCA GGCGGTGCGG
GGGCATACCC TGGTCTGGCA CCAGCAACTG CCCCGCTGGA TGTACGGCAG TTTTACCTCG
GCCGAGATGG AGGCCATCCT GAGCGATCAC ATCCGCACCG TGGTGGGGCG TTACCGCGGC
CAAATCGCCT ACTGGGACGT GGTGAACGAG GCGATCGGCG ACGATGCCCG GCTGCGCTCG
ACGCCCTTCG ATGTGCTGCC CGGCTACCTG GAAAAAGCCT TTCGGCTGGC CCGTGCGGCC
GACCCCAGCG CCAAGCTGTT CTACAACGAC TACGGGGCCG AGGGCCTGGG GGCCAAGTCG
GATGCCATCT ACGCGCTTCT GAAGGAGCTC AGAGCAAGGG GGGTGCCGGT GGATGGGGTG
GGCTTCCAGG TGCACGTGGA CTCGAGCTTC TCCCCCAGGC AGGTGCGGAT GGCCGAGAAC
CTCGAGCGCT TCGCCCAGCT CGGACTGGAA ATTCACATCA CCGAGATGGA CGTGCTGCTA
AGTAGCACCG GCTCCAGAGC CGAACGGCTC GAGAGGCAGG CCCAGGTGTA CCGCGAAGTG
CTGCAAGTCT GCTTGCGCCA GCCCCGCTGC AAGGTCTTCA CCCTGTGGGG CTTTACCGAT
GCCCACTCCT GGCGGGGGGC CAGCGAGCCC CTCATCTTCG ACGTGGATTA CCAACCCAAA
CCGGCCTACT TTGCCCTCCA GCGCACCTTA CAACAACCCT AA
 
Protein sequence
MYLTRWTFVG VCLGLMVWAQ PGPPLRSLAE ARKIQIGAAV EPSLLLQEPQ YAQVLAREFN 
LVVAENVMKW GALQTARGEY NFAAADLLLN FAQRNRQAVR GHTLVWHQQL PRWMYGSFTS
AEMEAILSDH IRTVVGRYRG QIAYWDVVNE AIGDDARLRS TPFDVLPGYL EKAFRLARAA
DPSAKLFYND YGAEGLGAKS DAIYALLKEL RARGVPVDGV GFQVHVDSSF SPRQVRMAEN
LERFAQLGLE IHITEMDVLL SSTGSRAERL ERQAQVYREV LQVCLRQPRC KVFTLWGFTD
AHSWRGASEP LIFDVDYQPK PAYFALQRTL QQP