Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0287 |
Symbol | |
ID | 8878357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 252387 |
End bp | 253388 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Endo-1,4-beta-xylanase |
Protein accession | YP_003506085 |
Protein GI | 291294687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000028358 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.661075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTAA CTCGCTGGAC TTTCGTGGGG GTTTGCTTGG GACTGATGGT ATGGGCCCAG CCCGGCCCGC CGCTGCGAAG CCTGGCCGAG GCTCGGAAAA TTCAGATCGG AGCGGCTGTG GAACCGAGTC TGCTGCTGCA GGAACCCCAG TACGCCCAGG TGCTGGCTCG GGAGTTCAAC CTGGTGGTGG CCGAGAACGT GATGAAGTGG GGGGCCTTGC AGACCGCTCG AGGTGAGTAC AACTTTGCCG CTGCCGACCT GCTTCTGAAC TTTGCCCAGA GGAACCGGCA GGCGGTGCGG GGGCATACCC TGGTCTGGCA CCAGCAACTG CCCCGCTGGA TGTACGGCAG TTTTACCTCG GCCGAGATGG AGGCCATCCT GAGCGATCAC ATCCGCACCG TGGTGGGGCG TTACCGCGGC CAAATCGCCT ACTGGGACGT GGTGAACGAG GCGATCGGCG ACGATGCCCG GCTGCGCTCG ACGCCCTTCG ATGTGCTGCC CGGCTACCTG GAAAAAGCCT TTCGGCTGGC CCGTGCGGCC GACCCCAGCG CCAAGCTGTT CTACAACGAC TACGGGGCCG AGGGCCTGGG GGCCAAGTCG GATGCCATCT ACGCGCTTCT GAAGGAGCTC AGAGCAAGGG GGGTGCCGGT GGATGGGGTG GGCTTCCAGG TGCACGTGGA CTCGAGCTTC TCCCCCAGGC AGGTGCGGAT GGCCGAGAAC CTCGAGCGCT TCGCCCAGCT CGGACTGGAA ATTCACATCA CCGAGATGGA CGTGCTGCTA AGTAGCACCG GCTCCAGAGC CGAACGGCTC GAGAGGCAGG CCCAGGTGTA CCGCGAAGTG CTGCAAGTCT GCTTGCGCCA GCCCCGCTGC AAGGTCTTCA CCCTGTGGGG CTTTACCGAT GCCCACTCCT GGCGGGGGGC CAGCGAGCCC CTCATCTTCG ACGTGGATTA CCAACCCAAA CCGGCCTACT TTGCCCTCCA GCGCACCTTA CAACAACCCT AA
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Protein sequence | MYLTRWTFVG VCLGLMVWAQ PGPPLRSLAE ARKIQIGAAV EPSLLLQEPQ YAQVLAREFN LVVAENVMKW GALQTARGEY NFAAADLLLN FAQRNRQAVR GHTLVWHQQL PRWMYGSFTS AEMEAILSDH IRTVVGRYRG QIAYWDVVNE AIGDDARLRS TPFDVLPGYL EKAFRLARAA DPSAKLFYND YGAEGLGAKS DAIYALLKEL RARGVPVDGV GFQVHVDSSF SPRQVRMAEN LERFAQLGLE IHITEMDVLL SSTGSRAERL ERQAQVYREV LQVCLRQPRC KVFTLWGFTD AHSWRGASEP LIFDVDYQPK PAYFALQRTL QQP
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