| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0285 |
|---|
| Symbol | |
|---|
| ID | 8878355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 250473 |
|---|
| End bp | 251456 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003506083 |
|---|
| Protein GI | 291294685 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0175684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.996665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGAAAGT CTGTTCGCAT CCCAACCTCC GGCCATGCCG GCCCCAGCCT GGCTATGCGC
TGGAGCAGCT TCCAGCGCCG CTATGCGCCC TACATTTTTG TCAGTCCCTT TTTCATCCTT
TTCCTGATTT TTGGCCTGTA CCCCACGCTG TTTTCTCTGT ACATGTCCTT TCAGGCCTGG
ACGCCCAGCG ACGGGTGGGG CCGGTGGAAG TACGTGGGCC TCGAGAACTA CACCTTCACC
CTGACCGACC CCATGTTCTG GCGCTCCATG TGGAACACCG TCTGGCTGGG GGTGTTCTCG
GGTATCCCAC AGCACCTGAT TGCCATTCCG CTGGCCTTTG TGATTCACAT GGTGCTCAGC
CGCTTCAAGA CCTTTGTCAC GGCGGTTTAC TTCCTCCCCT ACATCACTTC TTCGGTGGCC
ATTGCCCTCA TCTTCAACAC CCTTTTTGCC ACCAACAACG GTGTTATCAA CCTGGTGATC
GCCCACCTCA ACACCTGGCC TCTGCTGGGT GCGCTGCTGC CCGACCAGAA CATCAACTGG
TTCACCAGCG CCAACATCAA GTACGCCCTT GCACTGGTGG TAATCTGGCA GTTTACCGGC
TGGAACACTC TGCTCTACCT CTCGGCCATC CAGGCCATTC CCAAAGACCT TTACGAAGCC
GCTGCGGTGG ATGGGGCCAC CCGCGTTCAG CAGTTCCGCT ACATCACCCT GCCCCTTCTG
CGGCCCATGA TGTTTTTTGC TGTTAGCCTC ACCATCATTG GCAACATGCA GCTTTTTGAG
CAGCCCTTTG TGTTGCTGAA CGGGGGCGCC AGCGCGGCCA CACCGGGGGG ACAGACCGCC
ACCATGTACA TGTACCGCAC GGCTTTTGAG TGGCTTGAGA TGGGCACGGC GGCTTCCATC
GCCTGGATAC TCTTCGTTTT TATCGGCATA CTCACCTACC TCAACAACCT GATTTTTGGG
CGTGCAGCTC GAGGAGGCGA TTAG
|
|---|
| Protein sequence | MRKSVRIPTS GHAGPSLAMR WSSFQRRYAP YIFVSPFFIL FLIFGLYPTL FSLYMSFQAW
TPSDGWGRWK YVGLENYTFT LTDPMFWRSM WNTVWLGVFS GIPQHLIAIP LAFVIHMVLS
RFKTFVTAVY FLPYITSSVA IALIFNTLFA TNNGVINLVI AHLNTWPLLG ALLPDQNINW
FTSANIKYAL ALVVIWQFTG WNTLLYLSAI QAIPKDLYEA AAVDGATRVQ QFRYITLPLL
RPMMFFAVSL TIIGNMQLFE QPFVLLNGGA SAATPGGQTA TMYMYRTAFE WLEMGTAASI
AWILFVFIGI LTYLNNLIFG RAARGGD
|
|---|
| |