Gene Mrub_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0224 
Symbol 
ID8878292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp197591 
End bp198562 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_003506024 
Protein GI291294626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.868233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCC ACCTCACCGA GCAATCCTCC ACCCTGCGCC TCTCCCAGGG CCGCCTGCGG 
GTGGAGCTCG ACGAGCAAAC CCTGGCCGAA CTGCCCGCCC GCAAGGTGCG GGGGGTGGTG
GTCTGGGGGA ATGTGCGGCT GACCACCCCG GCCCTGGCCT TCCTGTTGCG GCAGGGGGTT
CCGGTGCTGT ACGCCACCTT GGAGGGCCAG CTTTACGGGC AGGCCCAGGC GCCCCAAAGC
CTCGCACCCG AGGTGCTGCG GGCCCAGCTT CTGGCACAGC AAAACCCCCT TCCGCTGGCG
CAGGGCTTTT TGCTGGGCAA GCTGCGTTCG GGGCAGATGC TGCTCGAGCG CCTCGCGCGC
CAGGCCCCCA TCACACCCCA GCAGGCCGAG ATAGAGGCCG CCCTCGAGGC GCTGCCCCAG
GCCCGGAGCC TCGAGGCCCT GCGCGGTATC GAGGGCAACG CCGCCCGCGC CTACTTTGCC
GGGCTGCAAG CGGTACTAGC GCCCTACGGC TTTTCCGGGC GCAACCGCCG CCCCCCCACC
GATGCCGTGA ATGCCGCGCT CTCCTATGGC TACATGGTGT TGCTGGGCCG GGTGTTGCTG
GCCCTGGGCA TAGCTGGCCT GCACCCCGAG CTGGGCCTGC TGCACACCGA GGGCCGCCGG
GTCCCCGCCC TGGCCTTCGA CCTGATGGAG GAGTTTAGGG TTTCGGTGGT GGACGCGGTG
GTAATTGCGG CCTTTTTACG CAGCGAGCTA ACCCCCCAGC AGCACAGCGA GGCCCGCAAC
GGCGGGGTTT ATCTGAACGA AGCCGGGCGC AAGGCGCTGC TTAGGCGGCT CGAGGAGCGC
TTTAGCCAGG AGGCCCAGCA CCCCAAGGGC TTCCGCAAGC CCTACCAGGA ACTCATCGAA
ACCCAGGCGG CCCGCCTCAA GGCGGCCATC CTGGGCCGCG AACCCTACAC CCCCTTCTAC
CTTTGGAGGT AA
 
Protein sequence
MTLHLTEQSS TLRLSQGRLR VELDEQTLAE LPARKVRGVV VWGNVRLTTP ALAFLLRQGV 
PVLYATLEGQ LYGQAQAPQS LAPEVLRAQL LAQQNPLPLA QGFLLGKLRS GQMLLERLAR
QAPITPQQAE IEAALEALPQ ARSLEALRGI EGNAARAYFA GLQAVLAPYG FSGRNRRPPT
DAVNAALSYG YMVLLGRVLL ALGIAGLHPE LGLLHTEGRR VPALAFDLME EFRVSVVDAV
VIAAFLRSEL TPQQHSEARN GGVYLNEAGR KALLRRLEER FSQEAQHPKG FRKPYQELIE
TQAARLKAAI LGREPYTPFY LWR