Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0110 |
Symbol | |
ID | 8878177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 87023 |
End bp | 88699 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | RNA binding S1 domain-containing protein |
Protein accession | YP_003505911 |
Protein GI | 291294513 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000433742 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.284586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACC AAGCTACCCA GACTCCAGTG GAAACTGGAA AAGAACCCCA AGCTTTTAGC ATGGAGCAGG CCCTGCAAGA TGCAGAGGCA AGGCTCGAGA AGACCGTCCA GCGCGGCCAG ATTGTCACCG GCACCGTGGT GCTCGTCACC AACGACGGTG TGATGGTAGA CATCGGGGCG CGCACCGAAG CCGTTATTCC GTTCAACCAG CTCACCGAGG AGAACCTGTC GGAAGAGGAG CTCAAGAATC TCCTCAAGCC AGGCGACACC GTGACTGCTT ACGTGGTTCG GGCCGACCTC GAGAACGGCC AGGTGGTGCT CTCCAAAAAG CGGGCCGAGG CCGATCAGAG CTGGGTCAAG ATCCAGGCCC TCTACGAGCA GGGCGAGCCG GTAATGGTGC AGGTTAAGGA AAAGGTCAAA GGGGGTCTGG TAGCGACCAT TGAAGGCCTT CGCGCTTTCC TGCCGGCCAG CCAGGTAGAT CTGAAGCGCA CCCCCGATCT CGACGAGTAC GTAGGCCAGA GCTTTTTGGT CAAAATCATC GAGCTTAACC GCAAAAAAGG CCGGATCATC CTGTCGCGCC GTACGGTGCT GGAAGCCGAG CAAAAAGCGG CCCGGAGCCA GGTGCTGGCC AGCCTGAAAG AAGGCGAGGT GGTCGAAGGC CAGGTGGTTG AGGTCACCGA TTTTGGCGTG TTTGTGGCTT TGGGCGGCGT GGATGGCCTG GTGCACCGCA GCGAAATTAC CTGGGGCCGC TTCAATCATC CCAGGGATGT GGTGCAGAAG GGCCAGACCG TCAAAGCCAA GGTGCTTTCG GTGGATACCG AGCGTGAACG GGTCAACCTC TCGATGAAGG CCCTCACCCA GGATCCCTGG CTGACCGTCT CCGAAAAATA CCCTGTGGGC TCCAGGCTCA CCGGCAAGGT GGTCGGTCTA ACCCAGTTCG GGGCCTTCGT GGAGGTGGAA CCCGGCCTCG AGGGTCTCAT TCACATCTCC GAGCTGTCCT GGACCAAGCG CCCCAAGCAC CCTGGCGAGA TCCTGAAGGA GGGCCAGGAA GTAGAGGCCC AGGTTCTGCG CATCGACCCG GAGGAGCGCC GGCTCTCGCT GGGCCTAAAG CAGACCCAGC CCGACCCCTG GAAGAGCCTG CCCGACCGCT ACCCCCCGGG TACGCCGGTC AAGGGCAAGG TCACTGGCCT CACCGACTTC GGGGTGTTTG TGGAGATCGA GCCGGGCATC GAGGGCCTGA TTCACGTCTC CGAGCTGGCC TACGAGCGCG TCGAGAAGCC TTCCGAGATC TTCAAGAAGG GCGACGAGGT GGAGGCGGCC ATCCTCCAGA TTGACCCGGT GGAGCAGCGC ATCAGCCTCT CGCGCAAACG CCTGCTACCT CCCCCGGCCC ATGCAGTTAG CATCCCTGGC GGGGAGGAAG GCGAGGGTCG CAAGGGCCGC CGCGAGGGCA AGGAAGGCGA GCGCCCCAAG CGTTCGAAGG GCAAAGGTGG GGCCCGCGAA GGGCGCGGCC GCGACCACGA CTACGACTAC GGCATGGGTG GCGGGGCTGC CTCCTATACC AACTACGACC CCAGCGTGGT TGCTACCTCC AACACCAACG TTAAGCTTGG CGATGTGTTC GGCGATCTCC TAAGCCAGAT TGCCTTGGAA GAGGACAAAG ACAAAGAAAA GGCCTAA
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Protein sequence | MEDQATQTPV ETGKEPQAFS MEQALQDAEA RLEKTVQRGQ IVTGTVVLVT NDGVMVDIGA RTEAVIPFNQ LTEENLSEEE LKNLLKPGDT VTAYVVRADL ENGQVVLSKK RAEADQSWVK IQALYEQGEP VMVQVKEKVK GGLVATIEGL RAFLPASQVD LKRTPDLDEY VGQSFLVKII ELNRKKGRII LSRRTVLEAE QKAARSQVLA SLKEGEVVEG QVVEVTDFGV FVALGGVDGL VHRSEITWGR FNHPRDVVQK GQTVKAKVLS VDTERERVNL SMKALTQDPW LTVSEKYPVG SRLTGKVVGL TQFGAFVEVE PGLEGLIHIS ELSWTKRPKH PGEILKEGQE VEAQVLRIDP EERRLSLGLK QTQPDPWKSL PDRYPPGTPV KGKVTGLTDF GVFVEIEPGI EGLIHVSELA YERVEKPSEI FKKGDEVEAA ILQIDPVEQR ISLSRKRLLP PPAHAVSIPG GEEGEGRKGR REGKEGERPK RSKGKGGARE GRGRDHDYDY GMGGGAASYT NYDPSVVATS NTNVKLGDVF GDLLSQIALE EDKDKEKA
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