Gene Mrub_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0001 
Symbol 
ID8881172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp37 
End bp1356 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content57% 
IMG OID 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_003505803 
Protein GI291294405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.09214e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCAAA ACACTGTCTG GCAGAATGTG CTCGAGTACG TGCGCCAAAG TATCACCGAG 
GTGGAGTACC ACACCTGGTT CGAGAAGATT CAGCCGCTGG GGGTGGTCAA CGGCTCACTC
GAGCTAGGGG TACCCACCAG CTTCTTCAAA GGCTGGATTG AGGACCACTA TGCCGAGCTG
CTCACCGAAG CACTGGCCCG TCTGGGGGCC CAGGCACCTC GCTTCGAGCT CAAGGTAATT
CCAGGAAAGC CTGTTCAGGA GGATATTTTT TCTGCATCCA CCCCCAACAA ACCCCAAGAG
GCGCGCGCCC GGCTCAATCC CAAGTACATC TTCGAGAATT TTGTGGTGGG GCAGAACAAC
AACCTTGCCC ACGCGGCGGC AGTCGCGGTC GCCGAGTCTC CCGGTAACGC GTACAATCCG
CTATTCATCT ATGGTGGCGT AGGCCTCGGC AAAACCCACC TGATGCACGC GGTGGGGCAC
TCGGTAGCCC AGCGTTTCCC TGATAAAAAA ATCGAGTATG TCTCCACCGA GACCTTTACC
AACGAGCTTA TCAATGCCAT CCGCGAGGAC CGCATGAGCG AGTTCCGCGA CCGCTACCGC
TCGGTGGATC TGCTGCTGGT AGACGATATT CAGTTTATCG CCGGCAAGGA GCGCACCCAG
GAGGAGTTTT TCCATACCTT CAACGCTCTT TATGAGGCCC GGAAGCAGAT TATTCTGTCG
TCAGACCGGC CCCCTAAAGA TATCCTGACC CTCGAGGCCC GCCTGCGCAG CCGCTTCGAG
TGGGGATTGA TTACCGATAT CCAGCCCCCC GACCTCGAGA CCCGGGTAGC CATCCTCAAG
ATGAACTCCG AGTATCGCAA TATGCGCGTT CCTGAGGAGG TACTGGAGTA CATCGCCAGG
CAAATTACCT CCAACATCCG CGAGCTCGAG GGCGCCCTGA TGCGGGTGAT CGCCTACGCC
TCACTCAACG GCGTACAGCT CAGCAAAGCA GTAGCCATCA AGGCTCTGTC CGATGTGTTT
GCAGCCACTG AGAGTGGCCT GGCTCCAGAA GAAATCCTCA AAGCTGTGGC CGAGCATTAC
AACCTCAGGC CGGAGGAGAT ACGCGGTGCA GGCCGACGTA AAGAGGTCGT GATTCCTCGT
CAAATTGCCA TGTACCTGAT CCGCGAAATG ACCCATGCCT CGCTACCGGA AATTGGGCAG
TTCTTCGATG GGCGCGACCA TACCACAGTG CTGTACGCCA TCCAAAAGAT TCAGGAGAGC
CTGGATACCG AGCCTAACCT CCAACAAACC CTCAAAAGCA TTCGTGAGCG CTTGCGTTAG
 
Protein sequence
MTQNTVWQNV LEYVRQSITE VEYHTWFEKI QPLGVVNGSL ELGVPTSFFK GWIEDHYAEL 
LTEALARLGA QAPRFELKVI PGKPVQEDIF SASTPNKPQE ARARLNPKYI FENFVVGQNN
NLAHAAAVAV AESPGNAYNP LFIYGGVGLG KTHLMHAVGH SVAQRFPDKK IEYVSTETFT
NELINAIRED RMSEFRDRYR SVDLLLVDDI QFIAGKERTQ EEFFHTFNAL YEARKQIILS
SDRPPKDILT LEARLRSRFE WGLITDIQPP DLETRVAILK MNSEYRNMRV PEEVLEYIAR
QITSNIRELE GALMRVIAYA SLNGVQLSKA VAIKALSDVF AATESGLAPE EILKAVAEHY
NLRPEEIRGA GRRKEVVIPR QIAMYLIREM THASLPEIGQ FFDGRDHTTV LYAIQKIQES
LDTEPNLQQT LKSIRERLR