| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1424 |
|---|
| Symbol | |
|---|
| ID | 8828389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 1359526 |
|---|
| End bp | 1360452 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | ribonuclease Z |
|---|
| Protein accession | YP_003483793 |
|---|
| Protein GI | 289597097 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAA CGATTCGCAT AGTTTTCTTT GGCACAGGAG GCTCTTGGCC CTCACCGGAG
AGAAATGTGA TGAGTATAGG AGTGCAGATT GATAGTGAGG TACTCCTATT TGACTGTGGT
GAGGGTACAC AAAGGCAAAT GATGCACACA AATATGAGTT TCATGAAGAT TAAGAGAATA
TTCATAACCC ATTATCATGG AGATCACTTT CTAGGTTTAG CAGGATTAAT TCAAACAATG
ACCCTCAATG AAAGAAAAGA GCCCCTTGAA ATTTATGGAC CTGAAAGAAC GATTGATATT
CTGACGAAAT TCCTGAATAT TGGGTACTAT TCACCATCTT TCAAAATAGT TCTCTATGAG
TTAAAGGGCA ATGAATCTTT AGATTTCGGG GACTATGTAG TCAAAGTGAT GAAAACAAAG
CACCCAGTTC CTTCCCTGGC CTATGCAATA AAAGAAAAAG ACATGCCAAG GATAGATAGA
AACAGAGCAA AGGCCTTAGG ATTGAATAGC AAGATACTTG AAAAGTTAAG AAAAAATGGG
AAAATAGAGT ATGAGGGAAA GGAGATCACA ATAGACGAGG TAAGCAATGG AGTTAGAGTG
GGGAGAAAAA TAGTGTATTC TGGAGATACT GCACCGATGG AAGAAATGAT TTCCTTTGCT
GCTAATGCCA ATGTGTTGAT TCATGAGGCT ACGGTAGAAT CATCCCTAGA AGAGCAAGCA
AATCAATATG GGCATTCATC TGCAAGGCAG GCGGCTAAAA TTGCTAAAAA GGCAAATGTG
GATGCCTTAC TTCTGGTACA CATAAGCCCA AGATACAAAG ATGCAAAGAT TATTGAAAAT
GAGGCAAAAA AGATATTCCC TAATAGCAGG GTAATGAATG ATTTTGATGA GTTCATAGTG
AAAGTTAAAA AAGTTCAGTC CTCGTAA
|
|---|
| Protein sequence | MASTIRIVFF GTGGSWPSPE RNVMSIGVQI DSEVLLFDCG EGTQRQMMHT NMSFMKIKRI
FITHYHGDHF LGLAGLIQTM TLNERKEPLE IYGPERTIDI LTKFLNIGYY SPSFKIVLYE
LKGNESLDFG DYVVKVMKTK HPVPSLAYAI KEKDMPRIDR NRAKALGLNS KILEKLRKNG
KIEYEGKEIT IDEVSNGVRV GRKIVYSGDT APMEEMISFA ANANVLIHEA TVESSLEEQA
NQYGHSSARQ AAKIAKKANV DALLLVHISP RYKDAKIIEN EAKKIFPNSR VMNDFDEFIV
KVKKVQSS
|
|---|
| |