| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1410 |
|---|
| Symbol | |
|---|
| ID | 8828374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1347878 |
|---|
| End bp | 1348966 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_003483779 |
|---|
| Protein GI | 289597083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGA TAATAGCTAA GGATAACAAA GCACGTTTGG GGATATTAAA AACTGCCCAT
GGCGAACTCA AAACTCCATT TTTTATGCCT GTAGCTACAA AGGCAACGGT GAAAACACTT
ACACCTGAGG ATTTGGAGAG TTGTGATGTA AAAGTTTTAA TCTCAAACTC GCTCCATTTG
TTCTTGAAGC CTGGATTGGA GGTTTTAGAA AAGCATGGGG GATTGCATAA GTTTATGCGT
TTTGAAGGTG CAATTTTCAC AGATAGCGGT GGATTTCAAA TGATTCGAAA GGGATTTTTT
GTGAGGGCAG ATGAAAGTGG AATTATATTT CGTTCTCCTT ATGATGGGCA GAAATACCTA
TTCACGCCTG AGTTTAGTAA AGAGGTACAG ATGAGAATAG GAAGCGATGT TGCAATGATG
TTAGATTATT GTGCAGAGTA TCCTGCAAGT TATGAAGAGG CAAAGAGAAG CGTGGAGCTA
ACCACAAAAT GGGCTCAGAA ATTTCCTAAA AATACTAAGG AACAACTAAG CTTTGGTATC
GTTCAGGGTT CGATTTATGA GGACCTTAGA GAGAAGAGTG CAAAAGATTT ATCCAATATG
GATTTTGATG GCTATGGAAT AGGCGGGCTA AGTATAGGAG AGCCGAAGAA AGTTATGCAC
AGAATGGTTG AGATTGTAGA TGGCATATTG CCAGAAAATA AACCGAGGTA TCTCATGGGA
GTGGGCTCAC CCTTGGAAAT AATTGAATCA GTAATTAGAG GAGTGGATAT ATTTGACTCG
GTTTTTCCCA CTAGAAACGG AAGACATGGA ACTGCAATAA CTTCTGAAGG AATGCTCAAC
TTGCGTAAGG CAGAATTTAA AAATGATATG CAACCGCTGG ATAATGAGTG TCAATGCTAT
ACTTGTGAGA ATTTTACGAG AGCATATATT CATCATCTTT TGCGCGAGAA AGAGATTCTT
GGAATGCATC TTCTCTCGTT GCACAATGTA TGCTTTATGA TTCAATTTAT GAAAAGGTTG
CGTGAAGAGA TAGAACAGGG AAATTTAGAA AAATTCAAAA AAGAGATGGA GAGAATTTAT
GGTACATAG
|
|---|
| Protein sequence | MFKIIAKDNK ARLGILKTAH GELKTPFFMP VATKATVKTL TPEDLESCDV KVLISNSLHL
FLKPGLEVLE KHGGLHKFMR FEGAIFTDSG GFQMIRKGFF VRADESGIIF RSPYDGQKYL
FTPEFSKEVQ MRIGSDVAMM LDYCAEYPAS YEEAKRSVEL TTKWAQKFPK NTKEQLSFGI
VQGSIYEDLR EKSAKDLSNM DFDGYGIGGL SIGEPKKVMH RMVEIVDGIL PENKPRYLMG
VGSPLEIIES VIRGVDIFDS VFPTRNGRHG TAITSEGMLN LRKAEFKNDM QPLDNECQCY
TCENFTRAYI HHLLREKEIL GMHLLSLHNV CFMIQFMKRL REEIEQGNLE KFKKEMERIY
GT
|
|---|
| |