Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1403 |
Symbol | |
ID | 8828366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1340809 |
End bp | 1341864 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003483772 |
Protein GI | 289597076 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.579406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAAAA TAAAAAACTT GCAAGTTAAA CTTGAGAATT TTTATATAAA CATAGACCAT CTCTCAATTG ATACTGGAGA TTATTTAATC ATTGTTGGCC CAACAGGAGC CGGAAAAACA GTTCTTCTTG AAACTATTGC TGGATTTCAT ACCCCTATTA CAGGAGATAT CCTATTAAAC GGAAAGAACA TCACAAACTT GCCGGCAAAT AAAAGGAACA TAGCCATGGT CTATCAGGAT TATATGCTCT TTCCACACAT GACCGTGGAA GAGAACATTG CATATCCCTT AAAAATAAAG GGTAAGAAAT GGAAAGATAA GGTGGAAGAA ATAGCCCAAC AACTTCAAAT AAAAAATCTC TTGAAAAGAT ATCCGAAAAC CTTGAGCGGA GGAGAGATGC AGAGAGTGGC TATTGCAAGA GCAGTTATAA CAAAGCCCTC GCTATTACTA TTGGACGAAC CTTTCAGTGC GTTGGATCCG AATATGAGAG ACTCTGCAAG GAAGATTATT GGGAAGTTTT TAGAAGAAAT GGAAATAGAT ACTGTGCATG TAACCCACGA TTTCTCGGAT GCATGGGTTC TTGGTAATAA GCTAGCAGTT ATGAGAGATG GAAAAATAGT GAGAGCTGGT AATGTTGAGG ATGTTTTTTC AAATCCACAG GATGAGTTCG TGGCAAAATT TCTTGGAGCA ACGAATATTT TAAGTGGTAA AATAAAGGGA GAATATGAAG GATTAACGGT AGTGGATGTG AATGGAGCAA ATATTTATAC ATTAGATAAA GCTCCTGAGG GAAAGGATGC TCTGCTGTCA ATAAGGCCTG AAAATATTAT ACTTTCTAAG CACAGGATAG AAGGGTCCCA TAGAAATTCC ATACTTTTGA AAATAGAGAG TATCTATAAA GAGGGGCATA TTGTTTGGGT AATATTAAAA AATGATGGAT TAAGCTTGAA AGTTATGTTG ACCCCGAATG CCGTAGAAGC TTTAAAACTC GGTGAGGGAG ACAAAGTATA TGCATCATTC AAGGCCAGTG CAACGAAAAT CGTAAGAATA ATATAG
|
Protein sequence | MLKIKNLQVK LENFYINIDH LSIDTGDYLI IVGPTGAGKT VLLETIAGFH TPITGDILLN GKNITNLPAN KRNIAMVYQD YMLFPHMTVE ENIAYPLKIK GKKWKDKVEE IAQQLQIKNL LKRYPKTLSG GEMQRVAIAR AVITKPSLLL LDEPFSALDP NMRDSARKII GKFLEEMEID TVHVTHDFSD AWVLGNKLAV MRDGKIVRAG NVEDVFSNPQ DEFVAKFLGA TNILSGKIKG EYEGLTVVDV NGANIYTLDK APEGKDALLS IRPENIILSK HRIEGSHRNS ILLKIESIYK EGHIVWVILK NDGLSLKVML TPNAVEALKL GEGDKVYASF KASATKIVRI I
|
| |