Gene Aboo_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1403 
Symbol 
ID8828366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1340809 
End bp1341864 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content37% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003483772 
Protein GI289597076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.579406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAA TAAAAAACTT GCAAGTTAAA CTTGAGAATT TTTATATAAA CATAGACCAT 
CTCTCAATTG ATACTGGAGA TTATTTAATC ATTGTTGGCC CAACAGGAGC CGGAAAAACA
GTTCTTCTTG AAACTATTGC TGGATTTCAT ACCCCTATTA CAGGAGATAT CCTATTAAAC
GGAAAGAACA TCACAAACTT GCCGGCAAAT AAAAGGAACA TAGCCATGGT CTATCAGGAT
TATATGCTCT TTCCACACAT GACCGTGGAA GAGAACATTG CATATCCCTT AAAAATAAAG
GGTAAGAAAT GGAAAGATAA GGTGGAAGAA ATAGCCCAAC AACTTCAAAT AAAAAATCTC
TTGAAAAGAT ATCCGAAAAC CTTGAGCGGA GGAGAGATGC AGAGAGTGGC TATTGCAAGA
GCAGTTATAA CAAAGCCCTC GCTATTACTA TTGGACGAAC CTTTCAGTGC GTTGGATCCG
AATATGAGAG ACTCTGCAAG GAAGATTATT GGGAAGTTTT TAGAAGAAAT GGAAATAGAT
ACTGTGCATG TAACCCACGA TTTCTCGGAT GCATGGGTTC TTGGTAATAA GCTAGCAGTT
ATGAGAGATG GAAAAATAGT GAGAGCTGGT AATGTTGAGG ATGTTTTTTC AAATCCACAG
GATGAGTTCG TGGCAAAATT TCTTGGAGCA ACGAATATTT TAAGTGGTAA AATAAAGGGA
GAATATGAAG GATTAACGGT AGTGGATGTG AATGGAGCAA ATATTTATAC ATTAGATAAA
GCTCCTGAGG GAAAGGATGC TCTGCTGTCA ATAAGGCCTG AAAATATTAT ACTTTCTAAG
CACAGGATAG AAGGGTCCCA TAGAAATTCC ATACTTTTGA AAATAGAGAG TATCTATAAA
GAGGGGCATA TTGTTTGGGT AATATTAAAA AATGATGGAT TAAGCTTGAA AGTTATGTTG
ACCCCGAATG CCGTAGAAGC TTTAAAACTC GGTGAGGGAG ACAAAGTATA TGCATCATTC
AAGGCCAGTG CAACGAAAAT CGTAAGAATA ATATAG
 
Protein sequence
MLKIKNLQVK LENFYINIDH LSIDTGDYLI IVGPTGAGKT VLLETIAGFH TPITGDILLN 
GKNITNLPAN KRNIAMVYQD YMLFPHMTVE ENIAYPLKIK GKKWKDKVEE IAQQLQIKNL
LKRYPKTLSG GEMQRVAIAR AVITKPSLLL LDEPFSALDP NMRDSARKII GKFLEEMEID
TVHVTHDFSD AWVLGNKLAV MRDGKIVRAG NVEDVFSNPQ DEFVAKFLGA TNILSGKIKG
EYEGLTVVDV NGANIYTLDK APEGKDALLS IRPENIILSK HRIEGSHRNS ILLKIESIYK
EGHIVWVILK NDGLSLKVML TPNAVEALKL GEGDKVYASF KASATKIVRI I