Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1393 |
Symbol | |
ID | 8828356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1332462 |
End bp | 1332839 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | cytidine deaminase |
Protein accession | YP_003483762 |
Protein GI | 289597066 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.245306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCA ATGAACTAAT AGAGTATGCA AAAAAAGCGG CGGATAATGC GTATGCACCA TACTCTAATT TTAGGGTTGG TGCAGCCGTA CTTGCCTGTG GGAGGATTTT TACAGGATGT AATATAGAGA ACTCCTCTTA CGGATTGACT ATATGCGCTG AGAGGGTAGC AATATTTAAG GCAGTTAGCG AAGGATGCAA GAATATTGAG AAAATTGCTG TATATGCAGA GAAAATGCCA TATCCTTGTG GGGCATGCTT GCAGGTTATG GCCGAGTTCT GCGATGAGGA GTGTGAAATT ACACTTACGG ATGGAGAGAA AGTAGAAAAA TATTATTTAT CCCGTTTACT TCCAAAGAGA TTCAAATTAG AGAAATGA
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Protein sequence | MDTNELIEYA KKAADNAYAP YSNFRVGAAV LACGRIFTGC NIENSSYGLT ICAERVAIFK AVSEGCKNIE KIAVYAEKMP YPCGACLQVM AEFCDEECEI TLTDGEKVEK YYLSRLLPKR FKLEK
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