Gene Aboo_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1393 
Symbol 
ID8828356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1332462 
End bp1332839 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content40% 
IMG OID 
Productcytidine deaminase 
Protein accessionYP_003483762 
Protein GI289597066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.245306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCA ATGAACTAAT AGAGTATGCA AAAAAAGCGG CGGATAATGC GTATGCACCA 
TACTCTAATT TTAGGGTTGG TGCAGCCGTA CTTGCCTGTG GGAGGATTTT TACAGGATGT
AATATAGAGA ACTCCTCTTA CGGATTGACT ATATGCGCTG AGAGGGTAGC AATATTTAAG
GCAGTTAGCG AAGGATGCAA GAATATTGAG AAAATTGCTG TATATGCAGA GAAAATGCCA
TATCCTTGTG GGGCATGCTT GCAGGTTATG GCCGAGTTCT GCGATGAGGA GTGTGAAATT
ACACTTACGG ATGGAGAGAA AGTAGAAAAA TATTATTTAT CCCGTTTACT TCCAAAGAGA
TTCAAATTAG AGAAATGA
 
Protein sequence
MDTNELIEYA KKAADNAYAP YSNFRVGAAV LACGRIFTGC NIENSSYGLT ICAERVAIFK 
AVSEGCKNIE KIAVYAEKMP YPCGACLQVM AEFCDEECEI TLTDGEKVEK YYLSRLLPKR
FKLEK