Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1185 |
Symbol | |
ID | 8828145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1134068 |
End bp | 1134727 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_003483556 |
Protein GI | 289596860 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACTTC TTGAATTTGA AGATGAAACT TTGGAGATTA AGCCTTCAAA GATTGTATGT TTGGGCAGGA ATTATGCAGA ACATGCCAAA GAAATGAAAA GTGAAGTTCC AAGCAGACCT GTTATTTTCC TCAAGCCTCC ATCTGCTTTG ATTGGCCCCG ATGAAACTAT AATTTTGCCT AAAGATAGTA AAAATGTTCA TCATGAGGTT GAACTTGCAG TTATAATTTC ACAGAAAGCA AAGAATGTAA AAATAGAAAA AGCCATGGAT TATGTGCTTG GATATACCAT TTTATTGGAT ATAACTGCTC GGGATTTGCA GGACGAGGCA AAGAAAAAGG GCTTGCCTTG GAGCGTGAGC AAGGGATACG ATACCTTTGC ACCGATAGGG CCAAGAGTTG TGGATGGGGA AATAGACCCC CATAATTTGG AAATAGGATT AAAAGTTAAT GGAGAGATAA GGCAGAAGGG AAATACAGCT CGGATGATAT TCAAAATACC TGAGATAATT TCTTACATTT CTTCCATAAT GACTCTGGAA CCTGGAGATA TAATTGCTAC AGGCACACCA AGCGGAGTGG GGAGAATAGA GAATGGAGAT GAAATAGAAG CTTGGATAGA GGGAATAGGG GTGCTAAAAG AAAAAGTTAT CAGAGAATAG
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Protein sequence | MVLLEFEDET LEIKPSKIVC LGRNYAEHAK EMKSEVPSRP VIFLKPPSAL IGPDETIILP KDSKNVHHEV ELAVIISQKA KNVKIEKAMD YVLGYTILLD ITARDLQDEA KKKGLPWSVS KGYDTFAPIG PRVVDGEIDP HNLEIGLKVN GEIRQKGNTA RMIFKIPEII SYISSIMTLE PGDIIATGTP SGVGRIENGD EIEAWIEGIG VLKEKVIRE
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