Gene Aboo_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1185 
Symbol 
ID8828145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1134068 
End bp1134727 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content39% 
IMG OID 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_003483556 
Protein GI289596860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACTTC TTGAATTTGA AGATGAAACT TTGGAGATTA AGCCTTCAAA GATTGTATGT 
TTGGGCAGGA ATTATGCAGA ACATGCCAAA GAAATGAAAA GTGAAGTTCC AAGCAGACCT
GTTATTTTCC TCAAGCCTCC ATCTGCTTTG ATTGGCCCCG ATGAAACTAT AATTTTGCCT
AAAGATAGTA AAAATGTTCA TCATGAGGTT GAACTTGCAG TTATAATTTC ACAGAAAGCA
AAGAATGTAA AAATAGAAAA AGCCATGGAT TATGTGCTTG GATATACCAT TTTATTGGAT
ATAACTGCTC GGGATTTGCA GGACGAGGCA AAGAAAAAGG GCTTGCCTTG GAGCGTGAGC
AAGGGATACG ATACCTTTGC ACCGATAGGG CCAAGAGTTG TGGATGGGGA AATAGACCCC
CATAATTTGG AAATAGGATT AAAAGTTAAT GGAGAGATAA GGCAGAAGGG AAATACAGCT
CGGATGATAT TCAAAATACC TGAGATAATT TCTTACATTT CTTCCATAAT GACTCTGGAA
CCTGGAGATA TAATTGCTAC AGGCACACCA AGCGGAGTGG GGAGAATAGA GAATGGAGAT
GAAATAGAAG CTTGGATAGA GGGAATAGGG GTGCTAAAAG AAAAAGTTAT CAGAGAATAG
 
Protein sequence
MVLLEFEDET LEIKPSKIVC LGRNYAEHAK EMKSEVPSRP VIFLKPPSAL IGPDETIILP 
KDSKNVHHEV ELAVIISQKA KNVKIEKAMD YVLGYTILLD ITARDLQDEA KKKGLPWSVS
KGYDTFAPIG PRVVDGEIDP HNLEIGLKVN GEIRQKGNTA RMIFKIPEII SYISSIMTLE
PGDIIATGTP SGVGRIENGD EIEAWIEGIG VLKEKVIRE