Gene Aboo_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1110 
Symbol 
ID8828070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1064801 
End bp1065931 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content40% 
IMG OID 
Productthiamine biosynthesis/tRNA modification protein ThiI 
Protein accessionYP_003483481 
Protein GI289596785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.142781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTTGG GATTAGATAA ATTTTTATAC AGAGACATCT CTGGCAATAG GATGATAATT 
GTAAGGTACG GGGAAATAGG GCTCAAAGGC AAGAATCGCA GAAAATTTGA AGAGTTGCTG
GCGAAGAATA TAGAGGTAAA GTTGAAGAGG TACGGTTACG CATCACACAC TAAAATTTTG
AGAGGAAGGA TATTTGTTTA TGCATCTCCG CAGGCAGTAC CTCTCATTGC CAAGTGCCCT
GGTGTGGTTT CTGTCTCTCC TGCAAAGGAG GTGAAGTATG AGGATATCTT CGAGTATTTG
AGTAAAGAGC TGGCCATATA TGAACCAGAG AGTTTTAGAG TTTATACTAA AAGAGTTGAT
AAGAACTATC CCAAAACATC TAAAGAGATA AATGAGGAGA TTGGAGCGTT TATCGTGAGA
GAGTTCGGAT GGAAAGTTGA TTTGGAAAAG CCCGAGCTTG TCATAGGTAT TGAAATCATA
GATGGGAAGT TCTATGTTTA CCTTGAAACA TATAAAGGCG TGGGAGGTCT ACCCGTGGGC
TCTGCAGGAA AATTAATAAT GCTCATCTCT TCAGGCATAG ATTCTCCTGT GGCTGCGTAT
CTTATGATGA AGAGGGGTGC GAAGATAATT GCTTTGCATA TGAAACACAG CGATTCTGGT
GTGGAAAAGG TAAAGAAAAT ATTAGAAGTT TTAGAGCAGT ACTCTCCAAG GAAAATTGAG
CTTGTTGTTA AGAATCATTA CGAAGAGCTA AGCAAGATTT CCGATAAATT GAGAGAGATG
CATAGAGAGC GGTGGACCTG CGTCTTTTGC AAATACACTA TGCTCAAAAT TGCAGACAGG
ATTGCAAATA AATATGGGGC ATTGGGTATA GTTACAGGAG ACTCTCTGGG GCAAGTGGCC
TCACAAACTT TAGAAAATAT GTACATTGAG AGTCAGGCTA CAAGTTATCC TATTTACAGG
CCGTTAATTG GAATGGACAA AAATGAGATT GAAGGCATAG CTAAGAATAT TGGCACTTAC
AATGTATTTC TCGAGGGGGG AGAGGAAAAA TGCCCCTTCA AGGCAAAATA TGTTGTGGTG
CAGGGAAATT ATGAAGAATT TGAGAAAATA AGAAAAAGGC TCGGAATCTA G
 
Protein sequence
MCLGLDKFLY RDISGNRMII VRYGEIGLKG KNRRKFEELL AKNIEVKLKR YGYASHTKIL 
RGRIFVYASP QAVPLIAKCP GVVSVSPAKE VKYEDIFEYL SKELAIYEPE SFRVYTKRVD
KNYPKTSKEI NEEIGAFIVR EFGWKVDLEK PELVIGIEII DGKFYVYLET YKGVGGLPVG
SAGKLIMLIS SGIDSPVAAY LMMKRGAKII ALHMKHSDSG VEKVKKILEV LEQYSPRKIE
LVVKNHYEEL SKISDKLREM HRERWTCVFC KYTMLKIADR IANKYGALGI VTGDSLGQVA
SQTLENMYIE SQATSYPIYR PLIGMDKNEI EGIAKNIGTY NVFLEGGEEK CPFKAKYVVV
QGNYEEFEKI RKRLGI