Gene Aboo_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0955 
Symbol 
ID8827909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp918312 
End bp920279 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content38% 
IMG OID 
ProductDNA helicase 
Protein accessionYP_003483326 
Protein GI289596630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTTG AAAATATTGA TTCTTACATA TCCTATTTCT CAAAATTAAT AAACTTAGAG 
AGAGAAGAAG AAATGCGCCG TCACTGGGAG GAGATAAAAA AATTAAGTGG GAAAAAGAGG
GAAAAATTGG GAAGGGCGAT ATTGAATCTA AAGGGAAAGT TCATTGGCAG GGGATTGGGT
GGTGCCTATC TTGTAAAATT CTCCCGCAAG GATATGCCAG AGAACGAAAT TATGGTTGGA
GACATTGTAA TCGTGAGCAT TGGCAAGGTC TCCCCTAAAA ATCCTCAAGC TACCGTTTAT
GAGAAGGGAA AAAGATACAT TATTCTGTCA TTTTCAAAAA GACCTCCCAA ATTTGTTTAT
AGTAGGGGTG TGAGAATTGA TCTTTATGCC AACGATATAA CATTTCAAAG GATGTTAAGC
GCTTTGCAAT CATTAAAAGA TGAGAATAAA TTGAGATTAA GGGCGATACT CTTAGGAAAT
GCAAATCCTG AACTTTGCAA AGTTGGGATT AAATTGGAGA ACAGGAGATT AAACAATTTT
CAGAGAAAAG CTGTAGAATC TCTTATTGGC TCTGAGCTTT TTTTAATCCA TGGTCCACCC
GGAACGGGGA AAACCACAAC CTTGGCAGAG GGAATAATTC AGATGGTTAA AAAAGGATAT
AGAGTTCTGG CAACAGCAGA TTCTAATGTA GCTGTGGACA ATTTGGTTGA GAAATTGGCT
CACAAAGTAA ATGTTGTTAG AGTGGGGCAT CCTGCGAGAA TTGGCAAAAG CATAATTGAA
CACACCTTGG ACTACATTGT TGCTCAGGAT ATTGAATATA AAAAAGCAAT GGAAATCTGG
GAGAAAATAG ACGATATGAG AGCAGAACAG GAAAAATACA AAAAACCCAC ACCACAATGG
AGAAGGGGTA TGGGCGATGA TGAAATTGTG TATCTAGCAA ATGCTTCCCG TAGCTACAGA
GGAGTGCCAG TAGAGATTAT GAAGAATATG GCCCAATGGA TCAAAATTCA AAGGAGAATA
GAGGAATATG TGAAAAAAGC AAAGAAGATG GAGGAAAAAG TAATAAAGAG AGTTTTAAAA
AATGCTGATG TTATATGCAC CACAAACTCA ACTGCTGGGA GCGAGTTACT ATACAATATG
GATTTTGATT TTGTGGTTAT AGATGAGGCC ACCCAATCTA TAGAACCATC CTGCTTGATT
CCTATGATAA AAGGTGATAG ATACATCATG GCTGGAGATC ATAGACAGCT GCCTCCAACT
ATAATGAGTT ATAAAGCAAA GGCACTGCAA TTAACCCTAT TTGAGAGATT TATAAAATTG
TATCCACATC TTTCAATAAC GCTAAGGGTC CAATATAGGA TGAATGAGAA AATAATGAAG
TTTCCATCAA AATTATTCTA CAAAGATTTG TTGATTGCTC ATCCAAGCGT GAAAAATAGG
AGCATAGAAG ATTTGGGAGT GAGTGCGGAG AATCTGGAAG AGCCAATGAG AAGTATATGC
GAACCACAAT CCATAATTGT ATTCTTGGAT ATGCAGAATT GCAAGGAAGA AAAGAGAGGG
GGCTCTACCT CATACTACAA CGAATGCGAG GCAGAGACGG TAAAGGATAC CGTGGATTGC
CTTTTAAAGA TAGGATTAAA GGAAAAGCAT ATTGGGATCA TTACTCCCTA CGATGACCAG
GTTGATTTAC TCCGTAGCAT GATTGAGGAT ATTGAAATAA AATCGGTGGA TGGTTTTCAA
GGCAGAGAAA AGGATGTTAT AATCATTTCC TTTGTTCGCT CTAACGATAA AGGAGACATA
GGATTTCTGG ACGATTTAAG GAGATTGAAT GTCGCTATTA CCCGTGCAAA GAGAAAACTC
ATTATGCTGG GAAATGCAAA AACACTAAGT TCAAATGAAG TATATACAAA GTTGATTGAT
TACACCCGCT CTGAAGGAAA ATTTTTAAAG ATTGATGACA ATTCTTAA
 
Protein sequence
MEFENIDSYI SYFSKLINLE REEEMRRHWE EIKKLSGKKR EKLGRAILNL KGKFIGRGLG 
GAYLVKFSRK DMPENEIMVG DIVIVSIGKV SPKNPQATVY EKGKRYIILS FSKRPPKFVY
SRGVRIDLYA NDITFQRMLS ALQSLKDENK LRLRAILLGN ANPELCKVGI KLENRRLNNF
QRKAVESLIG SELFLIHGPP GTGKTTTLAE GIIQMVKKGY RVLATADSNV AVDNLVEKLA
HKVNVVRVGH PARIGKSIIE HTLDYIVAQD IEYKKAMEIW EKIDDMRAEQ EKYKKPTPQW
RRGMGDDEIV YLANASRSYR GVPVEIMKNM AQWIKIQRRI EEYVKKAKKM EEKVIKRVLK
NADVICTTNS TAGSELLYNM DFDFVVIDEA TQSIEPSCLI PMIKGDRYIM AGDHRQLPPT
IMSYKAKALQ LTLFERFIKL YPHLSITLRV QYRMNEKIMK FPSKLFYKDL LIAHPSVKNR
SIEDLGVSAE NLEEPMRSIC EPQSIIVFLD MQNCKEEKRG GSTSYYNECE AETVKDTVDC
LLKIGLKEKH IGIITPYDDQ VDLLRSMIED IEIKSVDGFQ GREKDVIIIS FVRSNDKGDI
GFLDDLRRLN VAITRAKRKL IMLGNAKTLS SNEVYTKLID YTRSEGKFLK IDDNS