Gene Aboo_0885 details

Gene Information

• Locus tag: Aboo_0885
• ID: 8827835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 842347
• End bp: 843051
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 40%
• Product: glycerophosphoryl diester phosphodiesterase
• Protein accession: YP_003483256
• Protein GI: 289596560

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0088343
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGTTC TCGGGCATAA AGGTTATTCA GCAAAGTATC CCCCAAATAC ACTTTTATCA 
TTTAAAAAGG CCATAGAGTA TGGGGCGGAT GGAGTAGAAT TGGATGTATG GAGAACTAAG 
GATGGAGAAG TTGTAGTTTC TCACGATAGA AATCTTGAAA AGGTTGTAGG TGTGGATGTG 
GATATTAAGA AACCAAGCTA TGAAGAATTG CAGGATTACA AAATTGAAGG GGAGCCTATA 
CCTCTGCTTA GAGAGGTATA CGAAGCTTTG CCAAATGATG CAATAATAAA TGTAGAAATA 
AAGGACACGG ATGCAGTCAA ACCTTCGCTA AAGATAGCTG TAGAATTTGA TGCCCTGGAC 
CGTACACTTT TTTCATCTTT CAACATCAAG GCCCTTAAGA TTCTTAGAAA ATTAAACAAA 
GAGGCAAGGA TAGGCATTCT TGTCGGGGGC TTAAACGAAG TATTTACAAT TCCCTCGCAT 
ATATATTCCG TTAAGGCAAA TTATCTGAAT ATTCCTCATC AGATATCCGG GGTGGGTGAG 
TTCACTGCCA GAGCCCTTAT ACATTTTTAC AGATTGTTTG GAGTAAGAGT TGCAATATGG 
ACCCCAAACT CTCCTGATGA TCTGCAATTA TTCGAGGGTC TCTATGAGAT GGTCATCACA 
GATGAAGTTG AAAAGATGGT GAAATACAGG GATGAGCTCC AATGA 

 

Protein sequence

MLVLGHKGYS AKYPPNTLLS FKKAIEYGAD GVELDVWRTK DGEVVVSHDR NLEKVVGVDV 
DIKKPSYEEL QDYKIEGEPI PLLREVYEAL PNDAIINVEI KDTDAVKPSL KIAVEFDALD 
RTLFSSFNIK ALKILRKLNK EARIGILVGG LNEVFTIPSH IYSVKANYLN IPHQISGVGE 
FTARALIHFY RLFGVRVAIW TPNSPDDLQL FEGLYEMVIT DEVEKMVKYR DELQ