| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0843 |
|---|
| Symbol | |
|---|
| ID | 8827793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 803443 |
|---|
| End bp | 805899 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003483214 |
|---|
| Protein GI | 289596518 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000335755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAG TATCAAAGTG GGACGAAATA AGAAGGCATA TGAGTAGAAG CCTAAAACAG
GGTTGGAAAC TTTATAGCCA GAGTAAGTAT GGTGTAGTAG GGCTTGCATT GATTCTGATA
TTTGCGATAA TGGCAATTTT TGCTCCATTC CTCACTCCTT ATTCCCCTCA GTTTGAGGCA
CCTTCAATAG ATGCTTTAAG ACCTTATGTT TATGCATTTA ATACTACTGC ACCTGTTGAG
GACATTGCCA TAGGGTATAC TCAGTTAACA ACAGCACCAT CGGAGGGTGG TAATTGGATA
ATTCTTAACT ACGGCAAGAG TATCCAGGGT ATATTCATCC AGGATCCTTC TAGAGTTGGA
ATGCCTAATA AAGATCCTTG GGGGACCAAC TCTTTGAGAT TCACTTTGAA TCTAACAGAT
ATTCCTGGAA TAGGTGCTGA TGAGACAGTT ACAAATATTG CTTTTCTCTC CCCATCAACA
TCGGATCTTC AGTATCACTA CAGCGGTACA GGTCAAGATC CAAACTGGGA TGGAGAGCTG
GTGTTCACAA CTCAACATCA TCTGGTTATA TACGATATAT ATAATCTTAA GCCAAAATCC
AATTATGATA GGGTGATTGT CAAGAGCTTG CCCTACATAC CCACATGGCT CGTGGTTGAT
ACAACATCTT CTGGAAATCT TGAGGTGCCA GTTGTTTATG CGCCAGGTTC TGCGGTATTC
CCTTCTAGGT TCATAGGTGT TGGAGATGAG TATCATGCAA ATCTTTACTG GTATTATTAC
ACATATTCAA ATGATTCTTA TCTTCCAAAT GCACAGCAAT GCTTGTACCC TGTTCTAAAT
CAGAATTACA CGGAGAAAAT AATAATGAAG CCATTTCTAT TCTACAACGA TTATCTTTAC
AACGATAATC TTTCGAAGGA TCAAAATGTG TTTATCGTTC CTCTTGAGAC AAAGACTGTG
GTCTACAAAG GGTTTGATAC ACACACCTAT CCTCTACCAT TCCCCACTCC TGGTGCTCTT
CCGTTCGTTC CAAGGCCTAA TGTTGTTGAG ACAGTTCTTA ATTTCCCGCT AACTGCTGAG
CCAGGTTACT ATGCGGGAAG TCCAAATTTA GGGAAGAATT ACATATTCCT ACCTGCTCAG
AGCAACGGTA ATGCAGTTGT TTATGTGATG AATCCTGCTG GTTCAAATGG TCATGTGGTA
GTTGAGAATG ACTGGACAAT GAACATGGGA AGAGGTATGG TAACAGCTTC ACCATCAGTC
ACATATTCTG GAGGAAATTT CACAGTATTT AATGCAAAAT ATGTGAGCAA TGAGGATATG
AGTTATGTAT ATGAGTATAT GAAGGGAACA AACACAAAGT TTGAAATGGT CCCAATAAAT
AGCACCAAGA ATGGCGCCAT ACCCGTTAAT TCTAAGGTTG TTATGCTGGT AAATATGATA
CTCCAGAATG GAGAGATGCT TGCCCTTACA AATGGAAACG AGTTAACCCT TTATGTGTTG
GATTTTTCTG ATTATCAAAC AACTGGAAAA ATGATTGTTA GTAAGTTTAT GTACTATAAC
AATTATACCA AGAAATTGTC CCCATTCCCA TATCCTCCGG GAAGCAAGCT ATCTTACTTT
GAGTACATGG GAACTCTATC TGGCTCAAAA TATTCTCCTA CTGCGAGCTC CAATGTGTAT
ACTTTGTATT ACTGTAATGA TACCAAGACT GTAGGTCTCT TAAATCCAAA GGGTACTAAT
GTTCTTCCTC TCCCGCCAGG TAAGTATTTC AGCGGTAACT GGTACATCTT GGGTACAGAT
GATAAAGGTC ATGATATATG GACTTGGTTA GTATATGGCT CAAGAGTGGC GTTTATAGTG
GGTATTCTAG CAGCATTTTT CTCCGTGATG ATAGGTACGC TCTACGGTAT ATATTCAGGA
TATAAAGGTG GAGTTGTAGA TACTTTGCTA ATGAGATTTG TAGATATTAT GCTGACACTA
CCTGGTTTGC CCATATTGTT GATATTGACT GCTATCTTAG GTCCAAGCAT ATGGAACATA
ATTCTAGTCA TATCTGTGTT GGGATGGTCC GGAATAGCCA GGGTTATAAG GGCACAGACA
CTCTCTCTGA GATCTAGGCC ATTTGTGGAT GCTGCTAGAG TTGCAGGAGC CAGCAATACT
AGGATAATGG TATCACATAT ATTCCCCAAT GTGTTGCCTT ATTCCTTCCT TTACATGACT
CTTGGAGTCG CCGGTGCTAT TCTTTCAGAA GCTGCTCTGA GTTTCCTAGG TTTGGGAGAT
CCAAAGGCGA TATCTTGGGG ACAGATGTTG TACAGTATAC AAACTGCAGG AGCAGTTATG
TATGCATGGT GGTGGCTATT GCCTCCAGGT CTTTCAATTA CACTGATATC GCTTGGATTC
TATCTGGTTG GCAGGGCATT CGATGAAATT CTTAATCCGC GCTTGAGGAA GAGGTGA
|
|---|
| Protein sequence | MAEVSKWDEI RRHMSRSLKQ GWKLYSQSKY GVVGLALILI FAIMAIFAPF LTPYSPQFEA
PSIDALRPYV YAFNTTAPVE DIAIGYTQLT TAPSEGGNWI ILNYGKSIQG IFIQDPSRVG
MPNKDPWGTN SLRFTLNLTD IPGIGADETV TNIAFLSPST SDLQYHYSGT GQDPNWDGEL
VFTTQHHLVI YDIYNLKPKS NYDRVIVKSL PYIPTWLVVD TTSSGNLEVP VVYAPGSAVF
PSRFIGVGDE YHANLYWYYY TYSNDSYLPN AQQCLYPVLN QNYTEKIIMK PFLFYNDYLY
NDNLSKDQNV FIVPLETKTV VYKGFDTHTY PLPFPTPGAL PFVPRPNVVE TVLNFPLTAE
PGYYAGSPNL GKNYIFLPAQ SNGNAVVYVM NPAGSNGHVV VENDWTMNMG RGMVTASPSV
TYSGGNFTVF NAKYVSNEDM SYVYEYMKGT NTKFEMVPIN STKNGAIPVN SKVVMLVNMI
LQNGEMLALT NGNELTLYVL DFSDYQTTGK MIVSKFMYYN NYTKKLSPFP YPPGSKLSYF
EYMGTLSGSK YSPTASSNVY TLYYCNDTKT VGLLNPKGTN VLPLPPGKYF SGNWYILGTD
DKGHDIWTWL VYGSRVAFIV GILAAFFSVM IGTLYGIYSG YKGGVVDTLL MRFVDIMLTL
PGLPILLILT AILGPSIWNI ILVISVLGWS GIARVIRAQT LSLRSRPFVD AARVAGASNT
RIMVSHIFPN VLPYSFLYMT LGVAGAILSE AALSFLGLGD PKAISWGQML YSIQTAGAVM
YAWWWLLPPG LSITLISLGF YLVGRAFDEI LNPRLRKR
|
|---|
| |