Gene Aboo_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0820 
Symbol 
ID8827770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp783420 
End bp785354 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content41% 
IMG OID 
ProductDNA gyrase, B subunit 
Protein accessionYP_003483191 
Protein GI289596495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.929877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGT ATGATGCCAA AGCAATTCAA ATTTTGGAAG ATGCTCAGGC TGTTCGTAAG 
AGACCGGGCA TGTATATAGG GAGTACGGAT GAGCGAGGTT TGCACCACCT GATTTATGAA
GTGGTGGATA ACAGTATTGA TGAAGCCCTA GCAGGATATT GTTCTCGCAT AAATGTTATC
ATTCATAAAG ATGGTAGTGT GAGCGTGGAG GATGATGGTC GCGGCATTCC TGTGGATATG
CATCCAGAAA AAGGTAAGAG CGCTCTTGAA GTTGTTATGA CTGTTTTGCA CGCTGGAGCC
AAGTTTGATA AAAAAGCATA CCGGATAACT GGGGGATTGC ACGGAGTTGG TATCCATGTG
GTCAATTTTT TATCGGAGTG GTTGAAGGCA TATATAAAGA GGGATGGAAA AATATATTTT
CAATGGTACG AAAGGGGAAA ACCCCAGTGC GATGTGCATG TTGTGGGTAA GATAGAAAAT
GGAAATTTTG TTTGGATTGA AGATGGGCAT GATGAGAAAT TCAAGTACTC TCGTGGAACA
TACATCCGTT TTAAGCCAGA TGCAGAGATA TTTGAAACCA CGGAATTCAA ATACAGTATT
GTGAAGAAAA AATTGAGAGA TTTAGCCTTT CTAAATAGGG GTATTGAGAT AACCTTGGAA
GATGAGAGAT CCGGAAAGAA AGAGGTTTTT AAGTATGATG GAGGCATAGT TGAGTTTGTA
AAATTTTTAA ATGAAGGATA CAATCCTATT CATAGAGATG TTGTTTATGG AAAGGATGAG
CAGGATGGTA TAATAGTTGA ATTTGCTATG CAGTACAATG ATAGCACCTC TGAAAATCTA
TTGGCTTTTG TGAACACTAT TCATACAGTA GAAGGTGGCA CCCATGTATC TGGATTCAGA
AGTGCTTTAA CCAAGGTGAT CAACGATTTT GCCAAGAGCA GAAATTTGCT TAAGGGTATA
GATTCGCTGC AAGGGGAGGA TGTACGCGAA GGCCTTACTG CGGTTATTCA TGTTAAGCAT
CCAAATCCTC AGTTTGAAGG GCAAACAAAG GCAAAACTGG GAAATAGTGA GGTAAAGGGC
GTTGTATTTT CAATAGTAAA TAAGATTTTA AGCACTTATT TTGAAGAGCA TCCTGATGTG
GCCACGAACA TCGTTTCAAA GGCAATTGCG GCGGCAAGAG CCAGGATAGC TGCTAGAAAA
GCCAGGGAAT TAGCCAGAAG AAAAGGATAT CTAGAATCTC TCGACCTGCC AGGTAAACTT
GCAGATTGCA GCGAAGAGGA TCCCGAGAGA GCTGAATTAT TCATAGTGGA AGGTGACTCT
GCAGGTGGTT CTGCAAAGCA GGCCAGAGAT AGGCATTTCC AGGCAATATT GCCCTTGCGA
GGCAAAATAT TGAATGTGGA GAAAGCCCGC ATAGATAAGG TTTTCAAGAA TAATGAAATT
CGTGCGTTGA TTTCTGCGAT AGGCACCGGT GTGCGTGAGG ATTTTGATTA TTCTAAATTG
CGCTATGGAA AGATAATCAT AATGACCGAT GCTGATGTTG ACGGTGCTCA TATTCGCACT
CTTCTTTTGA CCTTCTTTTA TCGATATATG CCTGAATTGA TTGAAAAGGG TCATATTTAC
ATTGCCCAGG CCCCACTTTA TCGTATTCAG AAGGGCAAGA ATATTTACTA TGTTTACAGC
GATGAAGAGA AAGAGGAAAA ATTGAGAGAA TTGGGAAATG CATCTGTGCA AAGATTCAAA
GGTCTGGGTG AGATGAATCC ACAACAACTT TGGGACACTA CTATGAACCC TGAGACGAGG
AGGTTAATAA GGGTTACTAT AGAAGATGCT GCGGAGGCAG ATAGGCTGTT TTCAATTCTT
ATGGGTGAGC AGGTTGGGCC TCGTAGGGAA TTTATAATTC AGCATGCCAA GGAAGTAATG
AATATAGATA TATGA
 
Protein sequence
MSKYDAKAIQ ILEDAQAVRK RPGMYIGSTD ERGLHHLIYE VVDNSIDEAL AGYCSRINVI 
IHKDGSVSVE DDGRGIPVDM HPEKGKSALE VVMTVLHAGA KFDKKAYRIT GGLHGVGIHV
VNFLSEWLKA YIKRDGKIYF QWYERGKPQC DVHVVGKIEN GNFVWIEDGH DEKFKYSRGT
YIRFKPDAEI FETTEFKYSI VKKKLRDLAF LNRGIEITLE DERSGKKEVF KYDGGIVEFV
KFLNEGYNPI HRDVVYGKDE QDGIIVEFAM QYNDSTSENL LAFVNTIHTV EGGTHVSGFR
SALTKVINDF AKSRNLLKGI DSLQGEDVRE GLTAVIHVKH PNPQFEGQTK AKLGNSEVKG
VVFSIVNKIL STYFEEHPDV ATNIVSKAIA AARARIAARK ARELARRKGY LESLDLPGKL
ADCSEEDPER AELFIVEGDS AGGSAKQARD RHFQAILPLR GKILNVEKAR IDKVFKNNEI
RALISAIGTG VREDFDYSKL RYGKIIIMTD ADVDGAHIRT LLLTFFYRYM PELIEKGHIY
IAQAPLYRIQ KGKNIYYVYS DEEKEEKLRE LGNASVQRFK GLGEMNPQQL WDTTMNPETR
RLIRVTIEDA AEADRLFSIL MGEQVGPRRE FIIQHAKEVM NIDI