Gene Aboo_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0706 
Symbol 
ID8827652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp669405 
End bp670829 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content34% 
IMG OID 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_003483079 
Protein GI289596383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.266926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCGA AATTAGAAAA AACAGTTGCT ATAATCCTAG CAGGTGGATC TGGGATAAGG 
TTTGGAATGG AAAAACCAAA GCAATTTATG AAGGTGGCAG GAAAAACAAT AATTGAGCAT
ACCCTAGATG TATTTGAGCA TTGTGCATTT GTGGATGAAA TATTTGTAGT AGTCAATCCT
GAATGGTATG AGTACTTTTT AGAGTTATTT AAGAAAAATG ATTACAAAAA AGTGAAAAAA
GTTCTTTATG GAGGTAACAC AAGACAAGAA AGTTCCAGGA TAGGTGTATA TGCTACAGAT
GAAAATGTCC GTTACGTTCT TATCCATGAT GCTGTACGAC CTTTTGTAAC CAAAGAGATA
ATAGTAAGAA TTATTGATGC TTTGAAAGTA TATCCTGCAG TAGATACTGT AATTCCGACA
GCAGATACTA TAGTAAGAAT AAGAGAAAAT GATGAAATTG AGGATATACC TGATAGAAGT
AAACTTAGAA GAGGGCAAAC ACCTCAAGGA TTTTGGAGAG ATTCTATATT AAAAGCCCAT
CAATTAGCAG AAAAAGATGG AAAAAATAAC TTTACAGATG ATTGCTCGCT CTTTCTAGAG
TACAGATTAG GTCCTGTTAA GACTGTAGCA GGGGATATCA ACAATATAAA AATCACTTAT
CAGAGTGAGA TATATCTGGC AGATAGGCTA TTTCAGCTAA AAAGAACGAT ATTATCATTT
TCTGACAAGA ATTATATTCT TCATTCCCTT GAAAAATTAA AAGGGAAAAC TATTATAATC
TTTGGTGGGA GCAGTGGTAT TGGTAAAAAG ATATACACCC TCGTAAAGAA ATATGGTGGG
GTACCATATT CATTTTCAAG AAAAAATGGA GTTGATATAA CTAATTTTGA GAATGTGGTA
TCCGCTCTTG AAAAGGTTAA TGAAAAATAT GGAAAAATTG ATGCTGTCAT AAATACGGCA
GGGATTCTTA TAATGGGCTT TTTAAAGAAT ATGAATTTAA CAGATATACA CCAGATAATT
GATACAAATT ATTATGGCAC AGTGAATGTG GCGAAGGCAA GTATACCCTA TCTTCAAACT
ACAAGAGGGC ATTTAGTTCT TTTTACTTCT AGCTCTTATA CTAGGGGAAG AGAGAGATAT
TCAATATATT CCTCCACAAA AGCAGCGGTG GTAAACTTAA TGCAGGCCTT AGCTGATGAG
GTTTATGAAT TGGGTATAAA AGTTAATGCT ATATGCCCAG AAAGAACTGC AACTCCTATG
AGATTCAAAA ATTTCGGAAA AGAGCCGCTC GAAACTCTCT TAAAGCCCGA AACCGTGGCC
TATGCAACGC TATTGCTTAT CACCACAGAA ATAACAGGTC AGGTTATAGA TGTGAGGAAA
AATAGGGAAG AGAAAAGCTT ATTAAAAATA GGGCTAATTT CTTAA
 
Protein sequence
MSPKLEKTVA IILAGGSGIR FGMEKPKQFM KVAGKTIIEH TLDVFEHCAF VDEIFVVVNP 
EWYEYFLELF KKNDYKKVKK VLYGGNTRQE SSRIGVYATD ENVRYVLIHD AVRPFVTKEI
IVRIIDALKV YPAVDTVIPT ADTIVRIREN DEIEDIPDRS KLRRGQTPQG FWRDSILKAH
QLAEKDGKNN FTDDCSLFLE YRLGPVKTVA GDINNIKITY QSEIYLADRL FQLKRTILSF
SDKNYILHSL EKLKGKTIII FGGSSGIGKK IYTLVKKYGG VPYSFSRKNG VDITNFENVV
SALEKVNEKY GKIDAVINTA GILIMGFLKN MNLTDIHQII DTNYYGTVNV AKASIPYLQT
TRGHLVLFTS SSYTRGRERY SIYSSTKAAV VNLMQALADE VYELGIKVNA ICPERTATPM
RFKNFGKEPL ETLLKPETVA YATLLLITTE ITGQVIDVRK NREEKSLLKI GLIS