| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0617 |
|---|
| Symbol | |
|---|
| ID | 8827562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 592041 |
|---|
| End bp | 592892 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | peptidase S15 |
|---|
| Protein accession | YP_003482990 |
|---|
| Protein GI | 289596294 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000016795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGGT GGATAGGCGT AATAATAGCC ATAATTGTGG CAATAATAAT CATCTTTTTT
TTATTTGCCG CATTTGTTGC ATACAAACTA GTCAAGCCTA GTAGATTTGT TGGTTCTTGG
ACTCCGAAAG ATTTTGGAGC CGATTATGAA GATATAGAAT TAAAGACGGA AGATGGTGTG
AAGCTTAAAG GCTGGCATAT CAAGGGTGGA GAGGATTGTG TGGTGCTCTT GCACGGGTAC
AGCAGGAGTA GATGGGACGA TGTGTATATG CGCAAGGTTA TGGGAAAGAT GTGGAGTGCT
GGGTATTCTG TCCTTGCTGT GGATTTTAGA GCTCACGGAG AGAGTGAGGG CAAGTACACA
ACTCTTGGTG ATAAGGAGAT TCTGGATGTT AAAGCCATGG TGAAATATGC AGATCAGCAC
TGCAAGAAAG TGTATATAAT TGGCTATTCA ATGGGTGGAT TTCTAGCTCT AAAAGCAGCG
TATTTGGGTT TGGCGGATAA GGTTGTGGCA GATAGCCCTT ATATATACAC GGACAAGACC
GGGGCTCGGG GATTGAAGTA CTTTGCCAAC CTGCCCGAAT GGCTTTATGC TTTTGTTAAG
CCCTTTGCAA TACTGCTATC GGGAGTGAAG TACGAAAACA CAAATCCTTT CAAGTTTGCC
AAGAGTATCA AGGTTCCCAC TCTAATAATT GCGGGGAAGA AAGATCCCCT TGTAAAAATT
GAAGAGATTG AAGAATTTTT GAAAGTGGCT ACGAATGTGA AATTGTGGGT CACAGAAGGT
GCACATGTGC GCAGTATACT TGTGAACGAG GAAGATTACA TAAACAAGAT ATTGCAGTTT
TTTGCTCAGT AA
|
|---|
| Protein sequence | MAWWIGVIIA IIVAIIIIFF LFAAFVAYKL VKPSRFVGSW TPKDFGADYE DIELKTEDGV
KLKGWHIKGG EDCVVLLHGY SRSRWDDVYM RKVMGKMWSA GYSVLAVDFR AHGESEGKYT
TLGDKEILDV KAMVKYADQH CKKVYIIGYS MGGFLALKAA YLGLADKVVA DSPYIYTDKT
GARGLKYFAN LPEWLYAFVK PFAILLSGVK YENTNPFKFA KSIKVPTLII AGKKDPLVKI
EEIEEFLKVA TNVKLWVTEG AHVRSILVNE EDYINKILQF FAQ
|
|---|
| |