Gene Aboo_0478 details

Gene Information

• Locus tag: Aboo_0478
• ID: 8827423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 469684
• End bp: 470346
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 37%
• Product: ABC transporter related protein
• Protein accession: YP_003482851
• Protein GI: 289596155

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGAAG TTGAAAATTT AATAAAAGTT TATAGAAGAG GCGAGATAGA AGTTATAGCA 
ATAAGGGATG TAACCCTCTC CATAAAAGAT AGGGAATTTG TTATGCTTGT AGGTCCAAGC 
GGTTCTGGAA AGACAACATT TTTGCATCTT TTAGGAGGTA TAGATAGACC TACTGCTGGT 
AAAATATTTG TGAACGGTAA AAACATAGCA TTCTTTAATG ATAAAGAACT AACCGATTAT 
CGTAGAAAAG ATGTAGGCAT GGTTTTCCAA TTTTTTAATT TAATTCCCAC TCTGACAGCT 
ATAGAGAATG TAATGCTTCC TATGCAGTTT ATAGGAATGG GCAGGAGCGA GAGGAAAAAA 
AGAGCCGAAG AATTATTGAA ACTTGTAGGG ATTTATGAAA GGAAGGATCA CTACCCAGAT 
GAGATGAGTG GTGGAGAGCA GCAGAGAGTT GCTATTGCAG TTGCATTGGC TAATGACCCA 
CCTCTCATTT TGGCAGATGA GCCAACTGGA GAACTTGACA CTCAAACGGG TTTGGAGATT 
ATAAAAATCT TTAAAAAGTT AAATGATGAG GGCAAAACGG TTATAATAGC CACGCATGAT 
ATGCGCTTGG AGAAATATGC CACAAGAATA CTTGAAATCA GAGATGGAAA AATTACCGGA 
TAG 

 

Protein sequence

MIEVENLIKV YRRGEIEVIA IRDVTLSIKD REFVMLVGPS GSGKTTFLHL LGGIDRPTAG 
KIFVNGKNIA FFNDKELTDY RRKDVGMVFQ FFNLIPTLTA IENVMLPMQF IGMGRSERKK 
RAEELLKLVG IYERKDHYPD EMSGGEQQRV AIAVALANDP PLILADEPTG ELDTQTGLEI 
IKIFKKLNDE GKTVIIATHD MRLEKYATRI LEIRDGKITG