| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0407 |
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| Symbol | |
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| ID | 8827350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | + |
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| Start bp | 406123 |
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| End bp | 407709 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003482780 |
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| Protein GI | 289596084 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00229954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATGA ATAAGACAAC AGGATGGATT ATAGCCATAG TTATTGTAGT GATTTTAATA
ATAGCTGGAG TTGCAGTGTA CTTTGGCACA CAGCCCTCTT CACAGCCCAA ACCAGTTCAA
AAAGAGCAAT TGGTAATTGG TGTAACAGAT AAAGTTTCTG ACATAGACCC AGCAAATGCT
TACGACTTCT ATACTTGGGA AGTTTTGAAC AATATAATGA ATGGTTTGGT GACATACAAA
CCAGGAACCA CAGATATAGA ACCGGCAATA GCTGCAAGTT GGGATGTAAA TTCTAACGCA
AGTGTGTGGA CATTCCATCT CAGGCATGAT GTAAAGTATC CAAATGGAAC AGTCCTGAAA
GCACAGGATG TTGTTTGGAG TATTGAGAGG GTTATGAGAA TAAACGGTGA CCCTGCATGG
CTAGTTACCT CATTTGTCAA AAAGGTTACT GCTCCCGATG ATTTCACCGT TGTATTCACT
TTAAAGCACC CAACAGCTTA CTTCCTAGCT CTTCTGACAG ACCCACCATA TTTCCCGGTA
AGTAGAGCAT ACGATCCAAA CCACATACAG AGCGATCAAA CTGCTGGAGG CGCTGGACCG
TACTACATAA CCAAGTGGGT AAGAGATCAA GAGCTTGACC TGCAAGCAAA TCCATATTAC
TACGGGCCTC AACCAAAGAT AAAGAAGATA ATTATCAAAT TCTACAAAGA TGCAACTACA
ATGAGACTCG CCTTGGAAAA TGGAGAGATC AATATCGCTT GGAGAACTCT TAGGCCCACA
GATATAAAGA GCCTTAAGGA AGAGGGCAAG TACAATGTTG TTGAGATACC AAGCTCTTAC
ATTAGATACA TTTGTATGAA CACCGTGAAA GGTCCAACTA AGGATGTGCG TGTTAGACAG
GCATTGGCAT ATGCTGTGGA TAGACAACAG ATTGCAGAGA GAGTGTTCCA AGGAACTGTG
GAGCCTTTAT ACACATTGAT ACCCATTGGA ATGTGGTCCC ACAAGGATGT GTTCAAGGAG
AAATACGGTG CTTCTCCAAA TCTAAATGCA GCCAAGCAAT TACTCCAAGA GGCTGGTTAT
AGCACAACAA ACAAATTGAA GATTGATCTT TGGTACACAC CTTCTCATTA TGGAGATACT
GAGGCAGATT TGGCCCAGCT TCTTAAGCAG CAGTGGGAAG CTACCGGTAT GATTGAAGTA
AACATAAAGA GTGCTGAATG GCAAACATAT CTACAATATG CAAGAACTGG ATCAATGGAA
GTATACATGT TCGGATGGTA TCCAGATTAC CTTGATCCAG ATGATTACAC CACCCCATTC
TTGTCCTCCG TGGATAATGC AAATGGATGG GCTGGAACTG GATACAACAG CAGTCAGATG
AACCAAATAC TCTCAGAGGC ACAACAACTG ACTAACAAGA CACAGAGAGA AAAATTATAC
ATACAGGCAC AAGAGCTCCT TGCACAGGAT GTGCCCTATA TACCAATAAT ACAAGGCAAG
CTATATGTGG TAGCACAGAA AGATATCGGT GGAATAATCA TTGGTCCAGA TATGATTTTC
CACTATAACT ATCTATACTT CAAATGA
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| Protein sequence | MAMNKTTGWI IAIVIVVILI IAGVAVYFGT QPSSQPKPVQ KEQLVIGVTD KVSDIDPANA
YDFYTWEVLN NIMNGLVTYK PGTTDIEPAI AASWDVNSNA SVWTFHLRHD VKYPNGTVLK
AQDVVWSIER VMRINGDPAW LVTSFVKKVT APDDFTVVFT LKHPTAYFLA LLTDPPYFPV
SRAYDPNHIQ SDQTAGGAGP YYITKWVRDQ ELDLQANPYY YGPQPKIKKI IIKFYKDATT
MRLALENGEI NIAWRTLRPT DIKSLKEEGK YNVVEIPSSY IRYICMNTVK GPTKDVRVRQ
ALAYAVDRQQ IAERVFQGTV EPLYTLIPIG MWSHKDVFKE KYGASPNLNA AKQLLQEAGY
STTNKLKIDL WYTPSHYGDT EADLAQLLKQ QWEATGMIEV NIKSAEWQTY LQYARTGSME
VYMFGWYPDY LDPDDYTTPF LSSVDNANGW AGTGYNSSQM NQILSEAQQL TNKTQREKLY
IQAQELLAQD VPYIPIIQGK LYVVAQKDIG GIIIGPDMIF HYNYLYFK
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