Gene Aboo_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0302 
Symbol 
ID8827244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp299746 
End bp301635 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content48% 
IMG OID 
Productindolepyruvate ferredoxin oxidoreductase, alpha subunit 
Protein accessionYP_003482675 
Protein GI289595979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC AAAATATTCT CGCTGATGAG CCTGGAAGAA AGGAGTTTCT ACTCGGAAAC 
GAGGCAGTAG TAAGGGGAGC ATTAGAAGCA GGCGTGGATT TTGCGAGTAC CTATCCAGGC
ACACCATCCA GCGAGATAGG AAATGTTCTT TTCTATATTG CAAAGCAAGC AGGCGTGTAC
TTTGAATTCT CCACCAACGA AAAGGTTGCT ATGGAGGTCA GCGCTGCAGC AGCAGCCTCT
GGACTCCGTT CTTTAGTGTT TTTCAAGCAT GTGGGGTTAA ATGTAGCGGC GGATGCGTTC
ATGACAACAG CGTACATAGG CACCAACGGA GGATTGGTCA TATTAACGGC AGATGACCCG
AGCATGCATT CCTCGCAGAA CGAGCAGGAC AATAGGCATT ATGCCATGCT CTCCGGCATG
CCTATGATTG AACCATCCAA CGCACAGGAG ATGAAGGATT TCATCAAGGA AGCATTTGAG
ATTTCGGAAA AACTGAAACT TCCTGTGTTA TTCCGCACAA CAACTCGCGT CAATCATGTT
AGAGGCATAG TGGATTATGG AGAGATGAAA GAGAAGAGAG GAAAGGGTTA TTTCAAGAAG
GATCCAAAGA GGTATGTGCC CGTGCCCGAG AACTCAAGGA GAATGCATAA AGCACTTCTT
GAGAAGATAG AAAAAGCTAG AGAGTTAAGT AACAGCTCTC CGTTAAACAG GGTTGAGTGG
AACGATGGAG AGGTGGGAAT AATAACGAGT GGAGTCGCGT ACAATTATGT TTACGATGTC
GCCAATCAAC TGGGCTTAAA GGTGAACATC CTGAAACTAG CCTTCACGCA TCCATTCCCC
GATGAATTGG TTAAAGATTT CATCTCAAAG CACAAGAAAA TCATAATTGC GGAGGAATTA
GAGCCATACC TGGAGAGGGA GACTAGGATA GTGGCTGAGA TGAACAACAT CGATGTGGAG
ATTTACGGAA AGCTCAACGG CTACTTCCCA AGGGCTTACG AGTACAATCC AGATGTGATA
AAAGACGCTT TTGAGAAGAT TTTAGGCATT AAGGTTGAGA GAAAGGCCTA TGAGCCAAAG
CCCGTGGAGC TTCCAGCGAG GCCACCTGTG CTCTGTCCCG GCTGCCCTCA CAGAGCCACA
TACTACGCAG CTATGATGGC TCTCAAACAG CTCAAAATCA AAGACGCCAT AATAACCACG
GATATCGGTT GCTATACCCT GGGCATACAG AAGCCCTACG AAATGGCAGA TTACCTGCTC
TGCATGGGCT CAAGCATAGG TACAGCAGTT GGCTTCTCCA AGGCAACGGA GCAGAAGGTG
ATTGGTTTCG TGGGCGATTC AACCTTCTTC CACGCCGCAA TACCCGGGCT CATAGATGCG
TACCACAATC GTGCAAATCT CGTCTATGTC ATTCTGGATA ATAGGACTAC GGCGATGACT
GGGCATCAGC CGCATCCAGG ATTGCCCATG GACGGAATGG GCAACAAGGC ACCCTATGTG
GATATAGAGA AATTAGTGCG TGGCATCGGT ATTGACTGGG TTCGCACCGT GGACCCCTAC
GATGTCAATG AAACCATAAA GGTCTTCAAG GAGGCAATCC AGCACGAGGG AATTTCGGTG
ATAATAGCAA AGAGAGAGTG CGCATTACTC TGGGATGCTG CCAGGCGCAA GCAGGGAGAG
TGGTGGGTGT ACGAGATAAA TCAGGATAAA TGCACGCAGT GTGGAATATG CTCTGACTGG
CTCGCCTGCG TTGCCATATA CAAGGACAAG GATGATCTGG CTCCTAATGG AAAGCCAAGG
GTGTACATTA ATAATGCTCT TTGTGATGGA TGTGGAGTTT GCGCCACAGT TTGCCCATTT
AACGCTATTG AGAAGAAGGT GATAAAATGA
 
Protein sequence
MKYQNILADE PGRKEFLLGN EAVVRGALEA GVDFASTYPG TPSSEIGNVL FYIAKQAGVY 
FEFSTNEKVA MEVSAAAAAS GLRSLVFFKH VGLNVAADAF MTTAYIGTNG GLVILTADDP
SMHSSQNEQD NRHYAMLSGM PMIEPSNAQE MKDFIKEAFE ISEKLKLPVL FRTTTRVNHV
RGIVDYGEMK EKRGKGYFKK DPKRYVPVPE NSRRMHKALL EKIEKARELS NSSPLNRVEW
NDGEVGIITS GVAYNYVYDV ANQLGLKVNI LKLAFTHPFP DELVKDFISK HKKIIIAEEL
EPYLERETRI VAEMNNIDVE IYGKLNGYFP RAYEYNPDVI KDAFEKILGI KVERKAYEPK
PVELPARPPV LCPGCPHRAT YYAAMMALKQ LKIKDAIITT DIGCYTLGIQ KPYEMADYLL
CMGSSIGTAV GFSKATEQKV IGFVGDSTFF HAAIPGLIDA YHNRANLVYV ILDNRTTAMT
GHQPHPGLPM DGMGNKAPYV DIEKLVRGIG IDWVRTVDPY DVNETIKVFK EAIQHEGISV
IIAKRECALL WDAARRKQGE WWVYEINQDK CTQCGICSDW LACVAIYKDK DDLAPNGKPR
VYINNALCDG CGVCATVCPF NAIEKKVIK