Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0185 |
Symbol | |
ID | 8827123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 192158 |
End bp | 192889 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | proteasome endopeptidase complex, alpha subunit |
Protein accession | YP_003482559 |
Protein GI | 289595863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000839999 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCAG CGCAGATGGC GTATGATAGA GCAATAACGG TTTTCAGTCC TGATGGTCGC TTATTCCAGG TGGAATATGC AAGGGCTGCT GTAAAGAGAG GCACCACAAC CATAGGTTTG AAATTTAAGG ATGGAGTAGT TTTAATGGCT GATAAGAGGG TAAGAAGTAG ATTGCTTGAC CCAAAGAGCA TGGAGAAGAT ATTCCTGATT GATGAGCATA TCGGTTGTGC TACCTCCGGC CTTGTTGGAG ATGCCCGTGT GCTAGTGGAT TATGCTCGTC TTATAGCTCA GATTGAGCGT GTCACCTATG GGGAGAGAAT TTCTGTAGAG CATCTTGTTA AAAGGATAAG CGATTACAAG CAGCAGTATA CTCAGTATGG GGGAGTAAGA CCCTTTGGTG CATCCCTTCT TATTGCAGGA ATAGATGAAA AGGGAATTTA TCTTATGGAA ACGGATCCAA GCGGCACAAT TATGGGTTAT AAGGCAGATT GTATAGGTGG AGGAAGAGAT ACCGTTATGG AATTGTTTGA GAATGAATAC AGAGAGGATA TGGATTTTGA GGAAGCCATA ATGCTTGGCT TGAAGGGAAT AGATGCAGTT AGCGAAGACG GTATAACTCC TTTAACCTTG GAGATTGGAT ACATAAGGAA TGGTGGGCAA TTTACCATTA TGAGTGAGGA AGAGGTAGCA AAATATTTGG AAAAGTACAA GAGTGAGAAG AAAGAGGAGT AA
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Protein sequence | MQPAQMAYDR AITVFSPDGR LFQVEYARAA VKRGTTTIGL KFKDGVVLMA DKRVRSRLLD PKSMEKIFLI DEHIGCATSG LVGDARVLVD YARLIAQIER VTYGERISVE HLVKRISDYK QQYTQYGGVR PFGASLLIAG IDEKGIYLME TDPSGTIMGY KADCIGGGRD TVMELFENEY REDMDFEEAI MLGLKGIDAV SEDGITPLTL EIGYIRNGGQ FTIMSEEEVA KYLEKYKSEK KEE
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