Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0182 |
Symbol | |
ID | 8827120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 190038 |
End bp | 190775 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | exosome complex exonuclease 1 |
Protein accession | YP_003482556 |
Protein GI | 289595860 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000282409 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATGA AGAGTGATAT CAAACTCATA GATGATAATG GACTCCGCAT TGATGGACGC TTACCTAATC AACTCAGGCC CATAAAAATG GAGGTCGGAG TACTAAAAAG GGCTGATGGA TCTGCTTTTA TTGAGTGGGG TGGAAATAAG ATAATAGCGG CTGTATATGG GCCCCACGAA GCATATCCAA AGCATGTTCA GGAGGCTGAT AGGGCCATAG TACGTGCTCG CTACAGTATG GCTCCATTTA GTGTTGATGA GCGTAAGAGA CCAGGACCAG ATAGAAGGGC TATTGAGTTG AGCAAGGTGA TAAGTGAGGC CCTTGAAAGC GTTATATTTG TGGAAAAATA TCCAAGAACA AGCATAGATG TGTATATAGA AGTGCTTCAA GCAGATGCTG GTACTAGGGT TGCAGGTATA ACAGTGGCAT CTTTAGCGCT TGCAGATGCT GGCATACCAA TGCGGGATTT AATAGTTGGA TGCGCAGCTG GGAAGATAGA TGATGTTGTA GTTTTAGATT TGAACAAGGA AGAGGACAAT TTTGGACAGG CAGATGTTCC TATGGCTATA ATGCCTCGCA CAAAGGAAAT TGCCCTATTG CAGATGGACG GAGATATGAG CTATGAGGAG CTAACAACCG CAATGGATAT GGCTATGGAT GCTGCCGAGA AGATTCATGA AATGCAGGTT GAAGCACTAA AGAGAAAGTA TATTGAGGAG GTTGATGAGA ATGAGTAA
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Protein sequence | MGMKSDIKLI DDNGLRIDGR LPNQLRPIKM EVGVLKRADG SAFIEWGGNK IIAAVYGPHE AYPKHVQEAD RAIVRARYSM APFSVDERKR PGPDRRAIEL SKVISEALES VIFVEKYPRT SIDVYIEVLQ ADAGTRVAGI TVASLALADA GIPMRDLIVG CAAGKIDDVV VLDLNKEEDN FGQADVPMAI MPRTKEIALL QMDGDMSYEE LTTAMDMAMD AAEKIHEMQV EALKRKYIEE VDENE
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