Gene Aboo_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0182 
Symbol 
ID8827120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp190038 
End bp190775 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content44% 
IMG OID 
Productexosome complex exonuclease 1 
Protein accessionYP_003482556 
Protein GI289595860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000282409 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATGA AGAGTGATAT CAAACTCATA GATGATAATG GACTCCGCAT TGATGGACGC 
TTACCTAATC AACTCAGGCC CATAAAAATG GAGGTCGGAG TACTAAAAAG GGCTGATGGA
TCTGCTTTTA TTGAGTGGGG TGGAAATAAG ATAATAGCGG CTGTATATGG GCCCCACGAA
GCATATCCAA AGCATGTTCA GGAGGCTGAT AGGGCCATAG TACGTGCTCG CTACAGTATG
GCTCCATTTA GTGTTGATGA GCGTAAGAGA CCAGGACCAG ATAGAAGGGC TATTGAGTTG
AGCAAGGTGA TAAGTGAGGC CCTTGAAAGC GTTATATTTG TGGAAAAATA TCCAAGAACA
AGCATAGATG TGTATATAGA AGTGCTTCAA GCAGATGCTG GTACTAGGGT TGCAGGTATA
ACAGTGGCAT CTTTAGCGCT TGCAGATGCT GGCATACCAA TGCGGGATTT AATAGTTGGA
TGCGCAGCTG GGAAGATAGA TGATGTTGTA GTTTTAGATT TGAACAAGGA AGAGGACAAT
TTTGGACAGG CAGATGTTCC TATGGCTATA ATGCCTCGCA CAAAGGAAAT TGCCCTATTG
CAGATGGACG GAGATATGAG CTATGAGGAG CTAACAACCG CAATGGATAT GGCTATGGAT
GCTGCCGAGA AGATTCATGA AATGCAGGTT GAAGCACTAA AGAGAAAGTA TATTGAGGAG
GTTGATGAGA ATGAGTAA
 
Protein sequence
MGMKSDIKLI DDNGLRIDGR LPNQLRPIKM EVGVLKRADG SAFIEWGGNK IIAAVYGPHE 
AYPKHVQEAD RAIVRARYSM APFSVDERKR PGPDRRAIEL SKVISEALES VIFVEKYPRT
SIDVYIEVLQ ADAGTRVAGI TVASLALADA GIPMRDLIVG CAAGKIDDVV VLDLNKEEDN
FGQADVPMAI MPRTKEIALL QMDGDMSYEE LTTAMDMAMD AAEKIHEMQV EALKRKYIEE
VDENE