Gene Aboo_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0173 
Symbol 
ID8827111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp185166 
End bp185879 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content40% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003482547 
Protein GI289595851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00869778 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAAA TTAAAGGTAT TGTATATCTA ACAAGTAGAT GGATCCGGCG CCAACCTCTA 
TGGCTCGTAC AAGATTTATT CATTGTCATA GGTTTTGCAA TACTCATGTT TGTTTGGGGA
GGTATTACTG GTTTGAAAAA TGTTTTGGTA GCATGGTTCA TTTCTGGAGG ATGGAGTATG
GGAGTGAACC TAGTAGCTCA AAGTATAGGC TGGGATAAGC AGGGGAAGAC TATGGATATG
TTTATTGCAT CTCCTGTTAA GCCATTTCAT TACATATTTG GATATTTTAT TTCTGGCCTT
GTATTCATGC TTGCTGATTT TATATACATG CTTCCTCTCA TAATGTTTCT AAACGCTTGG
CTTATAGTTT TAGCATCCCT TGTGGCTGTA GCTCCATTGA TGGTAATAAG CAATCTCGTG
GGGTTAAGCA TAGTTATGCG AATCAAAAAG CCTACAAATA TATCTGCGAT AACAAACCCG
ATTCAGATGA TGCTTATCAT CCTTCCTCCT GTTTTTTATC CAGCGAGCGT TCTTCCTAGC
ACCTTGAGAT ATATCGTTTT GCTCATTCCT ACTGCAGCAG GGGCAGAGAT TGCTAGGCAA
CTTTCAGGAT TAAGTACTTG GAATAATCTG TGGTATCCAG TGGCAGTTCT TACAATCTGG
GTAGTGCTTG GGATTCTTGC ATCCTCTCGT GTGGTGAGAT GGGGAATGGA ATAA
 
Protein sequence
MGKIKGIVYL TSRWIRRQPL WLVQDLFIVI GFAILMFVWG GITGLKNVLV AWFISGGWSM 
GVNLVAQSIG WDKQGKTMDM FIASPVKPFH YIFGYFISGL VFMLADFIYM LPLIMFLNAW
LIVLASLVAV APLMVISNLV GLSIVMRIKK PTNISAITNP IQMMLIILPP VFYPASVLPS
TLRYIVLLIP TAAGAEIARQ LSGLSTWNNL WYPVAVLTIW VVLGILASSR VVRWGME