| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0134 |
|---|
| Symbol | |
|---|
| ID | 8827071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 132859 |
|---|
| End bp | 137745 |
|---|
| Gene Length | 4887 bp |
|---|
| Protein Length | 1628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | Fibronectin type III domain protein |
|---|
| Protein accession | YP_003482508 |
|---|
| Protein GI | 289595812 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.504623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGAAA CGAAGAGTAG TGGAGTTGTG AAGGTATTAG TGATTTCCTT GTTGCTTTTG
ATGATTTTCA GTGGGTTTGG AGTTGTTATG AATGTCACCG GTGTGAGCAC TTATAAGATC
TCTCCGACTT TTAATGAAGC AAATGTTGCG AAAACACATA TACTTGATAC ATCCTTCTCT
GATTTCAAAT TTAAGAAAAT TAACCAAGAG AATATAAATA AAATGTTAGA GTTGAGAGAA
AAAATAATGG AGAGATTGAA TGAAAGTAAT GGTGGAAAAT CATACCATAG CTTACCTGAA
TATAATATGG AAAATTCTGC AGTTCGTATG GAACATTTAT CGTATATGAA TACCCGTATA
GATTTTAAGA ATAATGCTAC GCCTATGATA GATGGACATG CTACAGGATT GATATTACCA
GATAAAAAAG AGCTTGAGAA TTTGATTGGA CATAAGATGA TAATCGGTTT GAATACAAAG
GTAAAAGAAC CAAGCACTGT AAGGTGGGAT TTGGATCCAC ATTTTCCTCC TGTGGGAGAT
CAAAAATGGC AGGGTTCTTG CACTGCTTGG GCAGTGAGCT ACTATCAAAA TGGGTTCTTG
CAGAGAATGA TTTACAACTG GACTGATGAT TCTCCTGCAC ATCTTATGAG CCCCTCTTGG
ACTTACAACA AGGTGAATGG AGGTGGAGAT TATGGAAGCA GTTTTGAAGG CAATGCCGAG
TTGATTGAAT CAGTTGGAGA CGCTACATTG GCTAATATGA CTTATAATCC TTCAGATTAT
ACTTCTTGGG GAAATGAGAG TGCGTGGAGA GATGCTCCTA AGCATAGAAT TGCAGGTTAT
TATCTTGTTT ATTTTGGAAA TGATAGTGGA ATAGAGACAA TAAAAGAGTT GCTTAGAGAG
GGGTATCTTG TTACATTTGC CATAGATGCT TCTCAGTATT ATAATGGATT TGTTGATGGA
AACTATATCA TATCTTCACA AGAATACAAT TCTTATGGGC TAAACCATGC ACAAACAATT
GTAGGATATG ATGATAACAT AACGGATGAT GGAGATGTAG GAGCGTTCAG AGTTGTAAAT
TCATGGGGCA CAGGATTTGG AGATCATGGT TTTTACTGGC TTACATACAA AGCCTTGGAG
GAAAAAGTAT CTCAGGGTTG GCCATATGCC TATGTTCTAG TTCCTATCTC TCAGCATTCC
TATAATCCAA AGCTCCTTGC AACCTGGCAT TTTAGCAACC CGGGACCAAG AGATGCTTCT
GTGAATATTG CTCTGGGCTT CCAGAATTCA AATTATTACA GAACTCCAAT CTGGGATGGT
GGAAACTATA GTTTTCCAAG TTTTATGGCT TTGGATATCA CCGAGTTTTA CAACGAATGG
GTAAATTCAA GTTACCAGAA TAAATTTTAT CTGAAAATAG GAACAAGCAA TAGTGGCTCT
AGCATAGTGG ATTCCTTTAA GATAGAATAC TATCCATATG GATATAAATA TCTGTGGCAA
AACTCAACAG AATCTCCAGA TGTCCCTGCC ACCACTCCTA TGGTTATCTC TTCTTCCCCA
TTTTCGCCTA GTGAATATTT TCCATACGTG CATGTCTCAT TGGTGAATGG TATCGCCCAT
ATCTATACGG ATAGCCTTGA ATATCCAGTA TGGATAGGAA ATGCAGGAAA TAAATCCGAT
GCTATACTAA TCACAACACA GGCAACAAAT GGCTGGAGCG TATCTCTGCC AAGTAAGGAG
GAACTATCTG CTGGAGTAAG TATAAAAGTG AATATGACTA TCCAATTGCC AACCAATGCC
AAGTTGGGAG ATTCATCACT TATAACCATC AAAGCTGTAT CAGAGAATGA CACATCAAAA
GTATATGAAT TAGAGTTTAA TGCATATTAT GTATCAAGAC CGATTCATAT AGAGAGCAAT
ACTGATTTTG CACAGCAGGC ACAGAAATAT GGATGGCCAG GTGACGGTAG CAAGAGCAAT
CCCTATGTTA TCAATAATTT GTACATTCTT GGCGAATCGG CCGTTGGAAT TTATATAAAT
TCAACAGATG TGTATGCAGT AATAAATGGT ACTCATATAG AGAATACACA GGGTGGGATC
TATTTGGAAT ATTCTAGCAA TATAGTGATT AAAAATTCAA TATTGAAAAA TATAATAGGT
TATGGTATTC TCTTGGATTC CTCTAGCAAC AATATTATAT CCAATAATAC CTGCAGCAAC
AATTGGGCTG GTATCAAGCT ATCGCATTCC AGCAACAATG TGATATCCAG TAATATCTGC
AATAACAATA ATGATGGCAT TGAGCTATGG GATTTCAGCA ACAACAATAT TATATACAAC
AATAACTGCA GCAACAATAA GGCTAGAATC AAGGTATGGT ATAATGAGGG TGGTATCTTC
TTGGAGTATT CCAGCAACAA TATGATTTCA AGCAACACCT GCATCAGCAA TGAGAGATAC
GGTATCTACC TACAAATATC TAGCAACAAC AGGTTATATG AAAATAAATT GGTAAACAAT
GGAATATCTT TATGGGGAGA TATAGGCGCA TTCACTACCC AAGAGATTCC TACAAACAAC
ACAGTGAATG GCAAACCAGT GTATTATTTC AAAAATGTAA ATATGAACAA TGCATCTGTA
CCCAGCAATG CAGGAGAGGT GATTCTTGGA AACGTTACCT GGCTAAAAAT TGAAAATCTA
CAAATACATA ACTCTACAGT TGCCATCGAA ATAGGAGGCT CATCCCACAT TACCATTAAA
AACAATAATT GTAGTAACAA CCGGCATGGC ATTAATCTGT TGTATTCTAG TAACAATACT
ATATCCAGTA ATACCTGCAA CAACAATGGA TATGGTATCG GATGGTGGTT TTCTGGTATT
GAACTGTGGT ATTCCAGCAA CAATGTGATA TCCAATAATA TCTGTAATGG CAATGGGAAT
GGTATCTTAG ATCTCTCTAA CAACAATGTG ATCTCAAACA ATACTTGCAA TCACAATCAG
GGTGAAGGCA TCTTTGTGTG GTATTCCAGC AACAATGTGA TATCCAATAA TATCTGCAAT
AACAATAATG ATGGCATTGA GCTATGGGAT TTCAGCAACA ACAATATTAT ATACAACAAC
ACTTGCAATG ACAACAATAG GTATGGTATC TTCTTGGAGT ATTCCAGCAA TAGTAACATT
ATACACAACA ATATCTGTAA TGGCAATGAA ATTAGCATCC TGCTGAGTGA TTCCAGCAAT
AATGTAATTT CCAACAATAC CTTCAGCAAC AATTGGGCTG GTATCGAGCT ATCCTATTCC
AGCAACAATG TGATATCTAA CAATCTACTT ACTAACAATA GCGGCTATTA TGGTATTCAT
ATATATTCTG GTTCCAATTG GAATCACATA TACAAAAACA ACTTCTATTA TAATGATGGC
TCAGGGAGCA CATTCAAATC TTCCTACGTC CAGGCACGAG ATGATGGCAC AAACAATCAC
TGGAATTCTA CATCAGGCAT CGGAAATTAC TGGTACGACT GGGCTAATAA CAACAATACG
AATGATCAGA ACGGAGATGG CATTGTAGAT TGGCCTTATA AGATAGACGG CTCTGCAGGT
GCAAAGGATT ACTACCCATT AAGATGCCCC ATAGGAGAAT CTACACCATC TCAACCTTTT
AATTTAACCG CTAAAACAGG TGATGGTTAT ATAAATTTAA GCTGGGAGCA ACCGGTATGT
AATGGGAGTT CTGACATCAT AGAATACAGA ATATACCGCA ATGGCAGTTT AATAGCGACA
GTGCAGGCGA ATCAGCTCTG GTACAATGAC AGTGATGTAA AGAACGGGGT CAGATACACA
TACTATGTAA CAGCAGTAAA TTCAATAGGA GAGTCCCAGC CGAGCAATGA GGTACAAGTC
ACGCCAATGA CGGTACCGAA TGCGCCAGAG AGTTTGCAAG CAAAGGCAGG AAACAGGTAT
GTAAATCTGA GCTGGGAGGT ACCGAGTGAT AATGGAGGAA GCGCTATAAC AGGATACAGA
GTGTACAGAA ATGGCAGTTT AATAGCGACA GTGCAGGCGA ATCAGCTCTG GTACAATGAC
AGTGATGTAA AGAACGGGGT CAGATACACA TACTATGTAA CAGCAGTAAA TTCAATAGGA
GAGTCCCAGC CGAGCAATGA GGTACAAGTC ACGCCAATGA CGGTACCGAA TGCGCCAGAG
AGTTTGCAAG CAAAGGCAGG AAACAGGTAT GTAAATCTGA GCTGGGAGGT ACCGAGTGAT
AATGGAGGAA GCGCTATAAC AGGATACAGA GTGTATAGAA ATGGCAGTTT AATAGCGACA
GTGCAGGCGA ATCAGCTCTG GTACAATGAC AGTGATGTAA AGAACGGGGT CAGATACACA
TACTATGTAA CAGCAGTAAA TTCAATAGGA GAGTCCCAGC CGAGCAATGA GGTACAAGTC
ACGCCAATGA CGGTACCGAA TGCGCCAGAG AGTTTGCAAG CAAAGGCAGG AAACAGGTAT
GTAAATCTGA GCTGGGAGGT ACCGAGTGAT AATGGAGGAA GCGCTATAAC AGGATACAGA
GTGTATAGAA ATGGCAGTTT AATAGCGACA GTGCAGGCGA ATCAGCTCTG GTACAATGAC
AGTGATGTAA AGAACGGGGT CAGATACACA TACTATGTAA CAGCAGTAAA TTCAATAGGA
GAGTCCCAGC CGAGCAATGA GGTACAAGTT ACTATAGCTC AGAGTGGCAA TAATAACCAA
AGCACAAACA CACAAAGCAA TGAATACTCG GGAATATTAA ACAATCCCTA CTATGTGTGG
TCTATCGTTC TGGGACTGAT AATTACAATT GTTATAATTG CTGTTGTAAT GAAGAAAAGA
AACGCAGGTA AAAAAAGAAG AATCTGA
|
|---|
| Protein sequence | MVETKSSGVV KVLVISLLLL MIFSGFGVVM NVTGVSTYKI SPTFNEANVA KTHILDTSFS
DFKFKKINQE NINKMLELRE KIMERLNESN GGKSYHSLPE YNMENSAVRM EHLSYMNTRI
DFKNNATPMI DGHATGLILP DKKELENLIG HKMIIGLNTK VKEPSTVRWD LDPHFPPVGD
QKWQGSCTAW AVSYYQNGFL QRMIYNWTDD SPAHLMSPSW TYNKVNGGGD YGSSFEGNAE
LIESVGDATL ANMTYNPSDY TSWGNESAWR DAPKHRIAGY YLVYFGNDSG IETIKELLRE
GYLVTFAIDA SQYYNGFVDG NYIISSQEYN SYGLNHAQTI VGYDDNITDD GDVGAFRVVN
SWGTGFGDHG FYWLTYKALE EKVSQGWPYA YVLVPISQHS YNPKLLATWH FSNPGPRDAS
VNIALGFQNS NYYRTPIWDG GNYSFPSFMA LDITEFYNEW VNSSYQNKFY LKIGTSNSGS
SIVDSFKIEY YPYGYKYLWQ NSTESPDVPA TTPMVISSSP FSPSEYFPYV HVSLVNGIAH
IYTDSLEYPV WIGNAGNKSD AILITTQATN GWSVSLPSKE ELSAGVSIKV NMTIQLPTNA
KLGDSSLITI KAVSENDTSK VYELEFNAYY VSRPIHIESN TDFAQQAQKY GWPGDGSKSN
PYVINNLYIL GESAVGIYIN STDVYAVING THIENTQGGI YLEYSSNIVI KNSILKNIIG
YGILLDSSSN NIISNNTCSN NWAGIKLSHS SNNVISSNIC NNNNDGIELW DFSNNNIIYN
NNCSNNKARI KVWYNEGGIF LEYSSNNMIS SNTCISNERY GIYLQISSNN RLYENKLVNN
GISLWGDIGA FTTQEIPTNN TVNGKPVYYF KNVNMNNASV PSNAGEVILG NVTWLKIENL
QIHNSTVAIE IGGSSHITIK NNNCSNNRHG INLLYSSNNT ISSNTCNNNG YGIGWWFSGI
ELWYSSNNVI SNNICNGNGN GILDLSNNNV ISNNTCNHNQ GEGIFVWYSS NNVISNNICN
NNNDGIELWD FSNNNIIYNN TCNDNNRYGI FLEYSSNSNI IHNNICNGNE ISILLSDSSN
NVISNNTFSN NWAGIELSYS SNNVISNNLL TNNSGYYGIH IYSGSNWNHI YKNNFYYNDG
SGSTFKSSYV QARDDGTNNH WNSTSGIGNY WYDWANNNNT NDQNGDGIVD WPYKIDGSAG
AKDYYPLRCP IGESTPSQPF NLTAKTGDGY INLSWEQPVC NGSSDIIEYR IYRNGSLIAT
VQANQLWYND SDVKNGVRYT YYVTAVNSIG ESQPSNEVQV TPMTVPNAPE SLQAKAGNRY
VNLSWEVPSD NGGSAITGYR VYRNGSLIAT VQANQLWYND SDVKNGVRYT YYVTAVNSIG
ESQPSNEVQV TPMTVPNAPE SLQAKAGNRY VNLSWEVPSD NGGSAITGYR VYRNGSLIAT
VQANQLWYND SDVKNGVRYT YYVTAVNSIG ESQPSNEVQV TPMTVPNAPE SLQAKAGNRY
VNLSWEVPSD NGGSAITGYR VYRNGSLIAT VQANQLWYND SDVKNGVRYT YYVTAVNSIG
ESQPSNEVQV TIAQSGNNNQ STNTQSNEYS GILNNPYYVW SIVLGLIITI VIIAVVMKKR
NAGKKRRI
|
|---|
| |