| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0061 |
|---|
| Symbol | |
|---|
| ID | 8826997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 60703 |
|---|
| End bp | 62004 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | Glycine hydroxymethyltransferase |
|---|
| Protein accession | YP_003482435 |
|---|
| Protein GI | 289595739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTAG AAGATGCCCT AAAAATAAAA GAGCTTGTTA AAAAGCATAC AGAGTGGTTT
CGTGACTCGC TTCCGATGAT TGCCTCTGAG AATTTAATAA GTCCTATGGC TCAAGAATTC
TTGATATCGG ATTTGCATAA CAGATATGCT GAAGGACTTC CAGGTAAGCG TTATTATCAG
GGCAATATCT ATGTTGATCA GATTGAAGAA CTAACCACAG AGCTTGCAAA AAAGTTGTTC
AAGGTGGATT ATGCCGATGT TCGCCCAATA AGTGGAACAA ATGCAAATCA AGCAGTACTC
TTCGCATTAA CAAAGCCGGG AGATGTTATA ACAGGTCCTC CATTGCAAGG TGGGGCCCAT
ATAAGCAGTG CAAAATTTGG AGCTGTGGGA ATGAGAGGAG TTCACAAGAT AGAGTATCCA
TTTGATGTGG AGGAGATGAA CATAGATGTT GATATGAGTG CGAAGCTGAT AAAAATAGTA
AAACCCAAGG TAGCCCTGTT TGGAATGAGC GTTTTTCTAT TCCCCGCACC TTTAAAAGAA
TTGCAAGATG CTTTCCAAGA AGCAGGCACG ACGGTATGGT ATGATGGAGC CCATGTTCTT
GGATTAATCG CGGGTGGACA GTTCCAAGAT CCTTTGAGGG AGGGAGCTCA TGTTATGACG
GGAAGTACCC ACAAAACTCT TCCCGGACCG CAGAGGGGAA TGATACTGGC AAATCCTCCC
GGGGATGAGG AGAAAAGGGA TAAGTTTTGG AAGAAAATTC AACGGGGCGT TTTTCCGGGA
GTGATAAGCA ATCATCATTT GCACCATATG GCTGCTCTGG CCATAACCCT TGCTGAGCAT
ATCGAATTTG GAAAGCAGTA TGCAGAGCAA GTTGTGAAGA ATGCTCAAAC ATTGGCTCAA
GAATTGTACG AGCTTGGATT CAAGGTGCTT GGAGAGAAAA ATGGATTTAC GAAGAGCCAT
ACGGTACTTG TGGATGTGGT GGCTCAAGGT GGTGGAAGAA AGGTTGCCGA GGATTTAGAG
AAGGCAAATA TTATCTGTAA TTACAATCTA TTGCCCTATG ATGATCCAAA GAAGCCTAGA
AATCCAAGCG GGATAAGGCT CGGGGTGCAG GAATTAACCC GTTTAGGTAT GAAAGAGAAT
GAAATGAAAT ATGTAGCAGA GTTGATAAAG AGAGTTGCAG TGGATGGAGA TATAGAAGGT
GTGAAGAAAG ATGTAAAAGA ATTAAAAGAA GAGTTCAACA CCATCCATTA CTGCTTCAAT
GAAGGTGTTG AAGCATATAA ATTTTTAGAA CTTGTAAAAT AA
|
|---|
| Protein sequence | MSLEDALKIK ELVKKHTEWF RDSLPMIASE NLISPMAQEF LISDLHNRYA EGLPGKRYYQ
GNIYVDQIEE LTTELAKKLF KVDYADVRPI SGTNANQAVL FALTKPGDVI TGPPLQGGAH
ISSAKFGAVG MRGVHKIEYP FDVEEMNIDV DMSAKLIKIV KPKVALFGMS VFLFPAPLKE
LQDAFQEAGT TVWYDGAHVL GLIAGGQFQD PLREGAHVMT GSTHKTLPGP QRGMILANPP
GDEEKRDKFW KKIQRGVFPG VISNHHLHHM AALAITLAEH IEFGKQYAEQ VVKNAQTLAQ
ELYELGFKVL GEKNGFTKSH TVLVDVVAQG GGRKVAEDLE KANIICNYNL LPYDDPKKPR
NPSGIRLGVQ ELTRLGMKEN EMKYVAELIK RVAVDGDIEG VKKDVKELKE EFNTIHYCFN
EGVEAYKFLE LVK
|
|---|
| |