Gene Nmag_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_1788 
Symbol 
ID8824628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand
Start bp1820689 
End bp1821801 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content63% 
IMG OID 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_003479924 
Protein GI289581458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGAA TTTCACTTGC AGGAGTACAG AAGCGGTATC CGGGCGGCGT TCTCGCAGTC 
AAAGGTGTCG ATATCGACAT CGAGAGCGGC GAGTTCGTGA CACTCGTCGG CCCGTCTGGC
TGTGGCAAGA CGACGACCCT CCGAACGATC GCCGGGTTCG AGACGCCAAC TGACGGGAGT
GTCCACATCG ACGGGAACGA GGTCACCGAC GCACCCCCGT ACGAGCGTGA CACCGGGATG
GTCTTCCAGG ACTTCGCGCT GTTCCCGCAC ATGACCATTC ACGAGAATAT CGCCTACGGG
ATGGAAGCTG ACGGTGACTA CACCACCGAG GAGATCGACG CCCGCGTCGA GGAAATGCTC
GACCTCGTCG AATTGCCGGG CGTCGGCGAC CGGATGCCGG ACCAGCTTTC CGGCGGGCAA
CAGCAGCGAA TCGCGCTCGC ACGTGCGCTC GCACCGCAAC CGAAGGCGCT GTTGCTCGAC
GAACCGCTCG CGAGCCTCGA CAAGCAACTG CGCGAGCAGA TGCAGGTCGA ACTGCGCCGC
ATTCAACAGG AGATTGGCAT CACAACCGTC TTCGTCACGC ACAATCAGGA GGAGGCGCTG
ACGATGTCGG ACCGGCTGGC CGTGATGAAC GACGGTCAGT TCGAACAGGT TGGCCCACCG
GAAGAGGTGT ACAACGACCC TGATTCCCGC TTCGTTGCGG ACTTCCTCGG GACGGCGAAC
ATCTTCGACG GTACCGTCTC GGCGGTCGAG AACGGCTACG CGCTGGTCGA CTGTGGCGAC
GTCTCCTTGC AGGCGGCGGC ACAGAACGGC GTCTCGGCTG GCGACGATAC CTCGGTTGTC
ATCCGTCCGG AGCGGTTCCG GTTCGAGGAC AGTGCCGCCA GCAACGCCGG TGTGGCCAGC
GCAGACGGTG GCACGAACGC CGGCGGAACG ACCGTCTTTG AGGGCGAAAT AACCTTCAAA
CGACATCTCG GCAGTAGTGT CGAATTCCAT CTCGAAACCG ACAGCGGTCG CGAAATCACC
GTTGTTCGGC GAAGCGGGAT GGACAAACGA GGCCCCGGAG ACCGAGTGGC GGTTTCCGTC
GCGGCCGACG ACTGCCGACT CGTGGAGGCA TAG
 
Protein sequence
MSGISLAGVQ KRYPGGVLAV KGVDIDIESG EFVTLVGPSG CGKTTTLRTI AGFETPTDGS 
VHIDGNEVTD APPYERDTGM VFQDFALFPH MTIHENIAYG MEADGDYTTE EIDARVEEML
DLVELPGVGD RMPDQLSGGQ QQRIALARAL APQPKALLLD EPLASLDKQL REQMQVELRR
IQQEIGITTV FVTHNQEEAL TMSDRLAVMN DGQFEQVGPP EEVYNDPDSR FVADFLGTAN
IFDGTVSAVE NGYALVDCGD VSLQAAAQNG VSAGDDTSVV IRPERFRFED SAASNAGVAS
ADGGTNAGGT TVFEGEITFK RHLGSSVEFH LETDSGREIT VVRRSGMDKR GPGDRVAVSV
AADDCRLVEA