Gene Nmag_1787 details

Gene Information

• Locus tag: Nmag_1787
• ID: 8824627
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: -
• Start bp: 1818679
• End bp: 1820688
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 61%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_003479923
• Protein GI: 289581457

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTTCCG ATACCGATAC CGATACCGAT ACCGATACCG ATACCGACAC TGGCGCTGAC 
ACTGACGCTA CCGCTACCGC TGGCACCAGC CCCGAACTCG CGCCAGACGG CGGAACAGTG 
ACCAGTAGCG ACGCCGAAAG CGGAGGCGAC TCCGGGCGTG CAGGATTGAA AGCCAGAGCA 
AAGTGGTACG CGCTGTCGTA TCCGATGTTT TGGCTCGTCG CGATCTTCTT CATCCCGCTG 
TGTCTGCTGT TCGTCTTCAG CTTCTGGGTG AACATCCCCG GCGGACAGTA CGAATTCGGC 
TTCACGTTCG AGAACTACTT CCGCTTCGTC AGTGCCGACT TCACGTCGTC CTGGCCGTTC 
ATCGAGCCCG GGCTCTACCT CAGCCAGACG TGGCTGACGA TCGAACTGGC ACTCGTGACA 
GCCATCTTCT CGCTGCTGCT TGGCTATCCG ATCGCGTACT ATCTCGCGCG AATGGATCGA 
CCGTGGCTGC GAAGCCTGCT GCTCATTACG ATCATCTCGT CGCTGTGGGT GACGTACGTC 
ATCCGCGCGT ACGCCTGGCA GGTTATTCTG GCCTCCGGCG GTGTCCTGAG TTCGATCGGT 
GTCGCAACCG GGATCCTCTC CGAGCCACAG TCGTTCTACC CGGGCTACTG GGGACTGGTC 
GTCGGCATGG TCTACGTCTT CCTGCCGTTC ATGATCCTCA CGCTCTACAG CAGCATCCGG 
AACATCGACG GCGAACTACT CGAGGCGTCG AAGAACCTCG GTGCGGGCTC AGCGAAGACG 
TTCCGTCGCG TGACGCTCCC CCTCTCGAAG AACGGGATCA CGAGCGGGAT GGCGCTCGTC 
TTCATCCTCG CACTGGGTTC GTACGTGCTC CCACGACTGC TCGGTAGCTC CGCCGAACGG 
ACGCTGCCGG TGCTGATCGA ACAGCAGATC ATGAGCGAGA GTAACTACCC GTTCGCCGCC 
GCGATGAGTA TCGGCCTGAT CCTCGTCGTG ATCGTGTTCC TCTGGGCGCT CATCCGCCTG 
ACGAACGTCA CCGCGGGAAG CCTCGGTGGG AGCGAAGAGG TCGCGACCGA CGGCGGCTCT 
CAGCAGACCG GCTCGACGGG AACCAGCCCG CTCGCGAAGG TTCGCGGCGG CTTTGGGAAC 
GCCGCGTCCG CGATCGGACT CACTGCCGCC GCCGCTCGGC TTGGCGCAGT GATCGACGCT 
GCCGTCACCC GCATCGACGC GAAAACCCGC GAGTCGGTGA TCTGGGTAAC GTTCCGTGTG 
TACGTCGCAG CTGCGATGGC GTTTATCGCC GTCCCGCTCG CGATCATCAT CGCCGTTTCG 
TTCACTCCTG AACAGTTCCT GACGTTCCCA CCGGGTGGGT TCTCCTTGCA GTGGTACGTC 
GAGTTCTTCA CGAGTGAATC GTGGATGGTG GCCTTGGTCA ACAGCTTCGC CATCGCAGGG 
GCCGCAGCGC TTCTGAGTAC GACGATCGGT GGCGGACTCG CGTTCGCTCT CGACCGATTC 
GACTACAAGT GGAGCTCCAT CTACGGAACG TTCGGCGTGC TACCGATCCT CGTGCCGCCG 
GTGATCATCG GGGTCGCGTT CCTGGTGTTC TTCCTCGAAC TCGGCATCGC CGGCTCGCGG 
ACGAGTATCA TCGTCGCACA CGGGATCTTC TACGCGCCGT TCCCGTTCAT CCTGATCTCA 
CAGGGGTTAG ACGAGATCGA CCGGACCTAC GAGGAGGCCG CGATGAACCT CGGCGCGTCG 
TCGCTGCGAA CGCTACGGAC CATCACGTAC CCGCTGATCC GGGCGAACGT GATCTCGGGT 
GCGCTGTTCG CGTTCATCCT CTCGTTGAAC GAGTACATCA TCGCGTGGCT GCTGTCGCTG 
TTCCTCGTCA ACACCATTCC AATCGAGATC TTCAACTCGC TTCGGTACGG CTACTCGCCG 
ACTATCGCGG CCGCCAGTGT AGTCTTCATC GCCCTCACTG TTGTCGTGAT GACGGCGATT 
GACCGATTCT CCGGAGGGAT CTGGGAGTAA 

 

Protein sequence

MGSDTDTDTD TDTDTDTGAD TDATATAGTS PELAPDGGTV TSSDAESGGD SGRAGLKARA 
KWYALSYPMF WLVAIFFIPL CLLFVFSFWV NIPGGQYEFG FTFENYFRFV SADFTSSWPF 
IEPGLYLSQT WLTIELALVT AIFSLLLGYP IAYYLARMDR PWLRSLLLIT IISSLWVTYV 
IRAYAWQVIL ASGGVLSSIG VATGILSEPQ SFYPGYWGLV VGMVYVFLPF MILTLYSSIR 
NIDGELLEAS KNLGAGSAKT FRRVTLPLSK NGITSGMALV FILALGSYVL PRLLGSSAER 
TLPVLIEQQI MSESNYPFAA AMSIGLILVV IVFLWALIRL TNVTAGSLGG SEEVATDGGS 
QQTGSTGTSP LAKVRGGFGN AASAIGLTAA AARLGAVIDA AVTRIDAKTR ESVIWVTFRV 
YVAAAMAFIA VPLAIIIAVS FTPEQFLTFP PGGFSLQWYV EFFTSESWMV ALVNSFAIAG 
AAALLSTTIG GGLAFALDRF DYKWSSIYGT FGVLPILVPP VIIGVAFLVF FLELGIAGSR 
TSIIVAHGIF YAPFPFILIS QGLDEIDRTY EEAAMNLGAS SLRTLRTITY PLIRANVISG 
ALFAFILSLN EYIIAWLLSL FLVNTIPIEI FNSLRYGYSP TIAAASVVFI ALTVVVMTAI 
DRFSGGIWE