| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_1059 |
|---|
| Symbol | |
|---|
| ID | 8823890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 1081475 |
|---|
| End bp | 1084435 |
|---|
| Gene Length | 2961 bp |
|---|
| Protein Length | 986 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | helicase |
|---|
| Protein accession | YP_003479205 |
|---|
| Protein GI | 289580739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACGTAC GCGGAACCGT CGCGGGTGAG GTCGAGGTGC GAACGGTATC GACCAGTTAC
GGCGAGAGTG ATCTCGCCGA GGTCCCCGTT CGACTGGCGA CAGCGGCCGA CGGACTCGAC
GACGGGAACA ACAAGGACGA CGGAAACAAC GAAAGCGACG CGACGACGTT CGAAGAGAAT
CGCGCGCAAA TCACAGATCG CAGCGGGCAG GTAACGCTCG GGGAACTCGA GTCCGATTCT
GAGCCTGGAC CGGACCTCGA TTCAAGCTCT GGCCCCACCA CCGACACCGA TATCGGTGCG
GACACGGGTT CAGACGCCGA CGCCGACGCC GACGGCGAAA TCGAGCCAAC CACCGTCACG
CTGTGGAACA AGTGGACCGA ATCCGCCGAG CTACTCGAGC CGGGCATGGA ACTGCTCGTG
ACGAACGCCG CGGAAGACGA GTACCAGGGT GAGCAGCGGT ACAAGACGAC CGGCGACTCC
TACGTCGTCG TCGAGCCAAG CTTCCACGTC AACGTCACCT CGATCCGCAA CTGGGTGGAG
TGTCCACGCC TCTACTTCCT GAACAAGCTC TCCGGCGTGC CGCTGAACTA CCCCGTCGTG
AAGGGGACCC TCGTCCACGA GGTGTTCGGC GACCTGCTTC GCGGGCGCGA CCTGGAAGAG
TCCATCGACG CCCGTGTCGA CGAGCGCGGC CTCGAACTCG GCCTGCTCGG TGAGACGGCC
GACGGTGCTG CCGAGGACGT CCGCGAGAAC GCGAAAGCGA TCGAGGGCTG GCTCGAGCAG
GGTCGCCTGA CCGACAAGGA TAGGGCGGCG ACAGCCGCCG ACAACCCGGA GCGGGCGTTC
GAGCCCGCGG AGGGGAGCTG GCGCTCTGAA CAACTGCTCA TCAGCGAGAC GTTCGGCATC
CGCGGGCGCG CTGACGCCAT CCGCCGCGGC GCGCCGGTCG AACTCAAGAC CGGGAAGAAC
CTCAAGAAAG AACCCCGGTT CAAGGACAAG GTGCAGGCCG CCTGCTACGC CCTGCTACTC
GAGGAGCACG GCGGCGACGT CGACACCGGC ACGCTTCTCT ACACCAAGAA CTCGGCGCTC
GACCGAAACG AGGAAACCGG CGACCTCACG CCCGCAAAGG AGTTCTCGAT GGGCAGCGGG
CTGCTCAAGT TCGTCGTCCG CCTGCGCAAC GAAATCGCCG CGATGGAGGT CACGGGCGAC
ATTCCGACCG GCTACGAGGG CAGCGCGAAG TGCGAGTACT GTTTCGAGCA GGACACCTGC
ATGGTCGTCT CGGGCCGCCT CGACCAGGAG TCGAAGGCCG GCCAGATCGG GCAGCCACTC
CCCGCGGAGG AACGCGAGTT CTTCGAACGT TTCTATCACG CTATCGAAGA GGAGCGTCGA
GAAGTCCACC GCGAGTTCGC CAAACTCTGG GAGCAGGACG CCCAGGAACG CGCCGACGAC
GACCGCGCGC TGATCGACCT CGCGTTCGAG GAGAGTCGAG CACTCGAGGA GGGCCGCTGG
GAACTCCGCG CGCGCCGGAC CGGAAGTGCG ACCTCGAAGC TCCGGGAGGG GGATCTGGTA
CTCGCGAGCG ACGGGCATCC GGTTCGCGGG AGTTCCGAAC TCGCCCGAAT CGAACGGCTG
GGAGAGGACG AGGTGGTCCT CACGGCCGAC GAGCGGGTCG AAGTGAGTCG CCTCGACGTC
TATCCGTCCG AACTCACTAC TGACCGCCTT CTCGCCGCGC TCCACGACGC GCTCCTGAAG
GGAGACAAGC GGCGCAAGGA CGTGCTGTTC GGCCGGGAAG AACCCGAGTT TGATTCGCCA
GACGAGGTGT TTATCGACAA CAACGAGGCC CAGGACGAGG CCGTGCGGAA GGCCGTCGGG
GCGGAAGACT GCGCGCTGAT CCACGGGCCA CCCGGCACTG GAAAAACCTA CACTATCGCT
CGCGCGATCC GCGCGATGGT CGAACGCGGC GAGCGCGTCC TTCTCTCGGC GTTTACGAAC
CGCGCGGTCG ACAACGCGCT GGAGGCGCTG CTCGACCAAC TCGAGGGCGT CATCGACGAG
GATCGGATTG TCCGCGTCGG CTCCGAGAGC GGCGTCCGCG AGGATATGCA GCCCTACCGG
TTCGACCGCT CGGGCGACCC CGGCGACCGC GCTGCCGCGT TGCAGAACGC GCAGGTCGTC
GCCGCGACCA CCGCGACCTG CGGCTCACGA GTCATGAAGG AGCAGGCGTT CGACGTTGCG
CTGGTCGACG AGGCCGCGCA GTTAACGGAG CCGGGGACCT TCGCGGCGGT CAACCTCGCG
GACCGGTTCG TGCTCGTCGG CGATCACGAG CAGCTTCCGC CGGTTGTCCG TGCCGAGAAC
GACCTTACAG AATCGCTGTT CGAGCGCCTC GTCGAACTCC ACCCCGAGGC CGGCGTCATG
CTCACCCAGC AGTACCGGAT GAACCAGCGC ATTCAGGCGT TCGCCTCGCA GGAGTTCTAC
GACGGCAAGC TCCGGCCCGC GAACGGCGCG GTCGCGGGGC GGACGCTCGA CGACCTTGCC
GGTGTCTCAC GCGAGGACCT GCCAACCAGA ATCCGAGACG CCGTCTCCTT CGTCGCAGTC
GAGGGCGAGA GCAGTCGATA CACGGACAGC GCCGAGGCCA CTCGCATCGC TGACCTCATC
GAAGACTATC GCGCTGCCGG ACTCGACCCG TCGGATATCG GCGTTATCGC TCCCTTCCGC
GCACAGGTCT CGGAGATTTC GAGACACGTC CCCGAGGCGG TTGCCGTCGA CACCGTCGAC
CGCTTCCAGG GCTCGAGTCA GGAGGTCATC ATCGTCTCGT TCACCGCGAC GGGGACACTC
GAGGGCCCCA TCTTCGACGA CTACCGGCGG ATCAACGTCG CCCTCACCCG ACCGAAGCGC
GCGCTCGTGC TCGTCGGCGA TCCGAACGCA CTCGAGACGG ACCCGGTGTA CGCACGGATG
CTCGAGTGGG CGCGGCGCTG A
|
|---|
| Protein sequence | MHVRGTVAGE VEVRTVSTSY GESDLAEVPV RLATAADGLD DGNNKDDGNN ESDATTFEEN
RAQITDRSGQ VTLGELESDS EPGPDLDSSS GPTTDTDIGA DTGSDADADA DGEIEPTTVT
LWNKWTESAE LLEPGMELLV TNAAEDEYQG EQRYKTTGDS YVVVEPSFHV NVTSIRNWVE
CPRLYFLNKL SGVPLNYPVV KGTLVHEVFG DLLRGRDLEE SIDARVDERG LELGLLGETA
DGAAEDVREN AKAIEGWLEQ GRLTDKDRAA TAADNPERAF EPAEGSWRSE QLLISETFGI
RGRADAIRRG APVELKTGKN LKKEPRFKDK VQAACYALLL EEHGGDVDTG TLLYTKNSAL
DRNEETGDLT PAKEFSMGSG LLKFVVRLRN EIAAMEVTGD IPTGYEGSAK CEYCFEQDTC
MVVSGRLDQE SKAGQIGQPL PAEEREFFER FYHAIEEERR EVHREFAKLW EQDAQERADD
DRALIDLAFE ESRALEEGRW ELRARRTGSA TSKLREGDLV LASDGHPVRG SSELARIERL
GEDEVVLTAD ERVEVSRLDV YPSELTTDRL LAALHDALLK GDKRRKDVLF GREEPEFDSP
DEVFIDNNEA QDEAVRKAVG AEDCALIHGP PGTGKTYTIA RAIRAMVERG ERVLLSAFTN
RAVDNALEAL LDQLEGVIDE DRIVRVGSES GVREDMQPYR FDRSGDPGDR AAALQNAQVV
AATTATCGSR VMKEQAFDVA LVDEAAQLTE PGTFAAVNLA DRFVLVGDHE QLPPVVRAEN
DLTESLFERL VELHPEAGVM LTQQYRMNQR IQAFASQEFY DGKLRPANGA VAGRTLDDLA
GVSREDLPTR IRDAVSFVAV EGESSRYTDS AEATRIADLI EDYRAAGLDP SDIGVIAPFR
AQVSEISRHV PEAVAVDTVD RFQGSSQEVI IVSFTATGTL EGPIFDDYRR INVALTRPKR
ALVLVGDPNA LETDPVYARM LEWARR
|
|---|
| |