Gene Nmag_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_0398 
Symbol 
ID8823220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand
Start bp389421 
End bp390698 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content63% 
IMG OID 
Productprotein of unknown function UPF0118 
Protein accessionYP_003478548 
Protein GI289580082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0034127 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATC GTCCCCCGAC CGGCGGCTGG TATGCAAAAC GGCCCGGGCT GACCGTTGTC 
GCTGTCGTCG CCGCGTTACT CGGACTTCTT GTCATCCTGC CGTATCTACA GTACGTGCTG
CTCGGCGTCG TCCTCGCGTA CATTCTCCGC CCTGCACAGC GCTGGCTCGA GCGCTACACG
GGTCCGCTTA TCGCCGCGCT GACACTCGTC GCCGTCGCGA TTCTCGCGAT TCTCCTGCCG
CTCACCTACG TCCTCATTGT CGCATTTCGG GAAGCACTCG GTCTCGTCGG TGCCATCCAG
AACGGGCAAC TCGACATCGA GGCGATCGAG TCTCAGATCG AGGCGACCGG CTACTCGATT
GACGTCGTCG AATTCTACCA GACCTACCAG GAGCCCATCG CGACGGGACT GCAGGGACTC
GCGATGAGCG CGCTCGATAT CGCCGGCGGC GTGCCGGGGA TACTCATCGG CCTTACCGTG
ACGCTGTTCG TCCTGTTTGC CCTTCTGCGA GACGGCAGCG AGTTCGCCGA GTGGGTCACG
CGCGTCCTGC CGGTCGAAGA CGAACTGCTC TCAGAACTGC TCTCGGAGCT CGATCAGCTC
ATGTGGGCGT CGGTCGTCGG CAACGTTGCA GTCGCCGCAA TTCAGGCTAT TCTCCTGGGT
ATCGGGCTTG CGTTACTCGA AGTTCCTGCC GTCGTGTTGC TTTCGGTCGT GACGTTCGTC
TTCGCGCTGT TGCCGCTCAT CGGTGCGTTC GGTGTCTGGG TCCCCGTTTC GTTGTATCTA
CTCGCAACGG GACAGTTCGT CGTGGCCGGC ATACTCGTCG CCTACGGCTC GATCGTCAGC
GCTTCGGATA CCTACATCCG GCCTGCGCTC ATCGGCCGGA CGAGCGCGTT CAACTCCGCG
ATCATCGTCG TCGGTATCTT CGGCGGGCTG ATCATCTTCG GCGCGGTCGG TCTGTTCATC
GGACCGGTCG TCCTCGGCGG CGCGAAGATC ACCCTCGACC TGTTCGCCCG AGAGCGCGCG
GCGGGTACCC AGCCAGTTAC CGGTGCCGGA CAACCGGGCG AGGACGAGGG AGTGCAGACG
GTCGGTACTG GTGTCGGAAC CGACAGGAAC GGCGACGACG ATGAGAGCAA CGGCGACCAC
GAGACCCGCG GTGCAGGCGA GAGTGACACC GACACGGACG AAGCAACCGA CAAAACAGAC
GACACCGACA CGGACGAAGC GACCGACAAA ACAGACGACA CCGCCGACGC CGACGGCTCG
GATTCAAGTA CCCAGTAA
 
Protein sequence
MADRPPTGGW YAKRPGLTVV AVVAALLGLL VILPYLQYVL LGVVLAYILR PAQRWLERYT 
GPLIAALTLV AVAILAILLP LTYVLIVAFR EALGLVGAIQ NGQLDIEAIE SQIEATGYSI
DVVEFYQTYQ EPIATGLQGL AMSALDIAGG VPGILIGLTV TLFVLFALLR DGSEFAEWVT
RVLPVEDELL SELLSELDQL MWASVVGNVA VAAIQAILLG IGLALLEVPA VVLLSVVTFV
FALLPLIGAF GVWVPVSLYL LATGQFVVAG ILVAYGSIVS ASDTYIRPAL IGRTSAFNSA
IIVVGIFGGL IIFGAVGLFI GPVVLGGAKI TLDLFARERA AGTQPVTGAG QPGEDEGVQT
VGTGVGTDRN GDDDESNGDH ETRGAGESDT DTDEATDKTD DTDTDEATDK TDDTADADGS
DSSTQ