Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2577 |
Symbol | |
ID | 8808361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2720184 |
End bp | 2721593 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | glutamine synthetase, type I |
Protein accession | YP_003461802 |
Protein GI | 289209736 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0018456 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCGCAG CCGACGTGCT GAAACAGATC CAGGAAAAGG AAGTCCGCTT TGTCGACTTC CGCTTCACCG ACTCCAAGGG CAAGGAACAG CATGTCACTG TGCCGGCCCA TGAACTCGAC GAAGAGGCCT TTGAAGAAGG CAAGATGTTC GACGGCTCCT CGATCTCCGG CTGGAAGGGC ATCAACGAGT CCGACATGAT CCTGATGCCG GACGCGGAGT CCGCCGTCCT CGATCCGTTC TTCGAAGACA TGACCATGAA CATCCGCTGC GACGTGGTCG AGCCGGCCAC CATGCAGGGC TACGACCGCT GCCCGCGCTC CCTGGCGCGC CGCGCCGAGG CCTACCTGCA GAGCACCGGC ATCGCCGACA CCGCGCTGTT CGGTCCGGAG AACGAGTTCT TCGTGTTCGA CGACGTGAAG TGGGGTGCCG ACCTGTCCGG CTCCTACTGC CGCGTGGACT CCTCCGAGGC CTCCTGGAAC TCCGAGCGCG TCTACGAAGA CGGCAACATC GGTCACCGTC CGGGCGTGAA GGGGGGCTAC TTCCCGGTCC CGCCGGTCGA CAGCCTGCAC GACATCCGCT CGACCATGTG CGAAGTGATG ACCGAGATGG GCCTGCACAC CGAGGTACAC CACCACGAGG TCGCCACCGC CGGCCAGTGC GAGATCGGTG TCGGTGCCGC GACGCTGACC CAGAAGGCGG ACGAGGTACA GATCCTGAAG TACGTGGTCC AGAACGTCGC CCACATGCAC GGCAAGACGG CGACCTTCAT GCCCAAGCCG ATCGTCGGCG ACAACGGCTC CGGCATGCAC GTGCACCAGT CGCTGTCCAA GGACGGCAAG AACCTGTTCT CCGGCGACCT GTACGGCGGC CTGTCCGAGA CCGCGCTGTA CTACATCGGC GGCATCATCA AGCACGCCCG CTCGCTGAAC GCCTTCACCA ACCCGTCCAC CAACAGCTAC AAGCGCCTGG TGCCGGGCTT CGAGGCGCCG GTGATGCTGG CCTACTCCGC GCGTAACCGC TCGGCCTCTC TGCGCATCCC GTTCGTGATG AGCCCGAAGG CCCGCCGCAT CGAGCTGCGC TTCCCGGACT CCACCGCCAA CCCGTACCTG GCCTTCGCCG CGATGCTGAT GGCCGGCCTG GACGGCATCC AGAACAAGAT CCACCCGGGT GACGCGATGG ACAAGAACCT CTACGACCTG CCGCCGGAAG AGGAAAAGGG CATCCCGCAG GTCTGCCATT CGCTGGACCA GGCGCTGGAA GCCCTGAACC AGGATCGCGA ATACCTGACC CAGGGTGGCG TGTTCACCGA CGACATGATC GATGCCTACA TCGACCTGAA GATGGAAGAA GTCACGCGCA TGCGCATGAC CACCCACCCG GTCGAGTTCG ACATGTACTA CAGCCTGTAA
|
Protein sequence | MSAADVLKQI QEKEVRFVDF RFTDSKGKEQ HVTVPAHELD EEAFEEGKMF DGSSISGWKG INESDMILMP DAESAVLDPF FEDMTMNIRC DVVEPATMQG YDRCPRSLAR RAEAYLQSTG IADTALFGPE NEFFVFDDVK WGADLSGSYC RVDSSEASWN SERVYEDGNI GHRPGVKGGY FPVPPVDSLH DIRSTMCEVM TEMGLHTEVH HHEVATAGQC EIGVGAATLT QKADEVQILK YVVQNVAHMH GKTATFMPKP IVGDNGSGMH VHQSLSKDGK NLFSGDLYGG LSETALYYIG GIIKHARSLN AFTNPSTNSY KRLVPGFEAP VMLAYSARNR SASLRIPFVM SPKARRIELR FPDSTANPYL AFAAMLMAGL DGIQNKIHPG DAMDKNLYDL PPEEEKGIPQ VCHSLDQALE ALNQDREYLT QGGVFTDDMI DAYIDLKMEE VTRMRMTTHP VEFDMYYSL
|
| |