Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2557 |
Symbol | |
ID | 8808341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2695153 |
End bp | 2696115 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | riboflavin biosynthesis protein RibF |
Protein accession | YP_003461782 |
Protein GI | 289209716 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00457502 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGCTGA TTCGCGGCCT GGGGCCGTCC GACAGCAGGG CTTCCACGGC AGCGGCCGTG CATGGCGCGG TGGTGACCAT TGGCAACTTT GATGGTCTGC ATCGTGGCCA TCAGGCTGTT CTGGGGCGCC TGCTCGAGGC GGCGCAGGAT CGCCAGGCGC CGTCAGTCCT GATGACCTTC GAGCCGCTGC CGCGCGAGTA CTTCGGCAGC CGGCCCGAGG CCCCGGACCC GCCCGGCCGC CTGCAGCGCC TGCGCGACCG CCTGATCACG CTCGGTGATA CCGGCCTGGA GGCCGTCTGG ATCCTGCGTT TCGACGCGCA GTTGGCCGGG CTGTCGGCGA CCGCCTTCAT CGAGGAGGTG CTGCACCAGC GCCTCGGTGC GCAGCATGTG CTGGTCGGGG ACGACTTTCG CTTCGGCCGT GGCCGCGAGG GGGACCAGGC CCTGATGCGC CGCGAGGGCG AGCGCCTCGG CTTCAGTGTC GAGGGCACCC CGACGGTCGC GGATGCCGAG GGCCGGATCA GCAGCACGCG GGTACGCGCG GCGGCGCTGG CCGGCGATTT CACGCGCATG GCCGAACTGC TGGGGCGGCC CTACCGGCTG CACGGGCGGG TCGCGCACGG CGACAAGCGC GGCCGCACCA TCGGCTTCCC CACCGCGAAT CTGCGTATGG GACCCTGGCC ACTGGCGTTG CGCGGGGTCT ACTCTGGCTG GCTGCGCCGT GCCTCGGGTG ACGCCCTGCC GGCGGTTGCC AATATCGGCT GGCGGCCGAC GGTGGCGGGT ACCGAACAGC GCTTGGAGGC GCATGTGCTC GAAGGCAGCC CCGATCTCTA CGGCGAGGCC GTGTGCTTCG AGCCGATCGC GCGGGTGCGC GGCGAGCAGC GCTTCGAGGG GCTGGACGCC CTGTGCGCGC AGATCGCCCG CGATGTCGAA ACCGCCCGCG AACAGATCAG GCAACCCGGG TGA
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Protein sequence | MRLIRGLGPS DSRASTAAAV HGAVVTIGNF DGLHRGHQAV LGRLLEAAQD RQAPSVLMTF EPLPREYFGS RPEAPDPPGR LQRLRDRLIT LGDTGLEAVW ILRFDAQLAG LSATAFIEEV LHQRLGAQHV LVGDDFRFGR GREGDQALMR REGERLGFSV EGTPTVADAE GRISSTRVRA AALAGDFTRM AELLGRPYRL HGRVAHGDKR GRTIGFPTAN LRMGPWPLAL RGVYSGWLRR ASGDALPAVA NIGWRPTVAG TEQRLEAHVL EGSPDLYGEA VCFEPIARVR GEQRFEGLDA LCAQIARDVE TAREQIRQPG
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