Gene TK90_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2542 
Symbol 
ID8808326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2678278 
End bp2679420 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_003461767 
Protein GI289209701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0311867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0508646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAG ATTCGCAGTG CGACATCCTG TGCGTCGTCG GCGCGCGCCC CAACTTCATG 
AAGATCGGCC CGGTGATGCG GGCCCTGCAG CAAGCCCGGA TACCGGCGCA GCTTGTGCAC
ACGGGGCAGC ACTACGACCC GGCGATGAAC GAGCGCTTCT TTGCCGATCT GCAGATCCCC
CGACCGGATA TCAATCTCGA GGTGGGCTCC AGCTCGCATG CCGTGCAAAC GGCCGAAGTG
ATGATGCGTT TCGAGGGCGT GCTGGACCGC GTGCAGCCTC GAGCCATTCT CGTGGTGGGT
GATGTGAACT CCACGATCGC CTGTGCCCTG GTGGCGGCCA AGAAGGGGGT CGGGGTGATC
CATGTGGAAG CGGGGTTGCG CAGCTTCGAT CGCAGCATGC CGGAGGAGGT GAACCGGGTG
CTGACCGACC AGATCTCCGA CCTGCTGTTC ATCACCGAGC GCCATGCCCG CGACAACCTT
GTGCGCGAGG GTATCGCCCC CGATCGGGTG CACTTTGTCG GCAACGTGAT GATCGATACC
CAGCTCTACA ACCTGGAGCG TGCCGTGCCG TGGCAGGAGA CGTTGCGGTC GGCCGAGGTG
GATACCGATG CGTTCTCCGA CAACCGGGAC TATGGGGTGC TGACCTTGCA TCGCCCCTCC
AATGTCGACC ATGCGCCGGT GATGAAGCGC CTGGTCGACA GCCTGGTGGC CATCGCCCGG
GAACTTCCCC TGGTATTCCC GCTGCACCCC CGCACCCGGG CCCGTCTGCA GGGGTTCGGG
CTGGAGTCTG CCCTGCGCGA GGCGCCGATC GCCGTGCTGC CACCGGCCGG CTACCTGGAG
ATGCTGGGAC TGATGAAAGA CGCCCGCGTC GTGCTGACCG ACTCCGGCGG CATGCAGGAG
GAAACCACGG CCCTCGGGGT GCCCTGCATC ACCCTGCGCG AGAACACGGA ACGCCCGATC
ACGATCGATG AAGGTACCAA TATTTTAGTA GGCAATGACC CGCAACGACT GATGGAGTCT
TTCCGCGAGG TCATGGACCA TGGGGGCAAA CAGGGGCGCA TCCCGGAATA CTGGGACGGC
AATGCCGCAG AACGCATCGT GGCCGTCGTG GCTGACTGGC TGAATCACGC AAGAAAATCC
TGA
 
Protein sequence
MSTDSQCDIL CVVGARPNFM KIGPVMRALQ QARIPAQLVH TGQHYDPAMN ERFFADLQIP 
RPDINLEVGS SSHAVQTAEV MMRFEGVLDR VQPRAILVVG DVNSTIACAL VAAKKGVGVI
HVEAGLRSFD RSMPEEVNRV LTDQISDLLF ITERHARDNL VREGIAPDRV HFVGNVMIDT
QLYNLERAVP WQETLRSAEV DTDAFSDNRD YGVLTLHRPS NVDHAPVMKR LVDSLVAIAR
ELPLVFPLHP RTRARLQGFG LESALREAPI AVLPPAGYLE MLGLMKDARV VLTDSGGMQE
ETTALGVPCI TLRENTERPI TIDEGTNILV GNDPQRLMES FREVMDHGGK QGRIPEYWDG
NAAERIVAVV ADWLNHARKS