Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2457 |
Symbol | |
ID | 8808238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2584644 |
End bp | 2585993 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | type I secretion outer membrane protein, TolC family |
Protein accession | YP_003461683 |
Protein GI | 289209617 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGGT CCGCCAAACG TATCTTCTCC ACGCTGGCTA CCGCCGGCAT TGCCCTGCTG GTGGCAAGCC CTGCCCCCGC CGCCAGTCTG CTTGAGGTCT ATGAGCGCGC TGCCACGGAA GACGCCGAGC TGCGCGCCGC CGAGGCCGAA TACCGCAGTG TCCTGGAACG CCGTCCGATT GCCCGTTCCG CGTTCCTGCC GCAGATCACC GGCGAGGCCG AGGCCGGCGC GTTCTATAAC GACTATCGCG ACCAGGACAG CTTCGACGGA CGCCAGACCA GCTTTGGCGT ATCCCTGGTG CAGAGCCTCT ATGACCGGCG CAACTTCATC GAACTGACCC AGGCGGATCT CGAGATCGCG CGCGCCGAGG CGGAGCTGGA CGCAGCCCGC CAGGACCTGA TCCTGCGTGT ATCCGAGGCC TACTTCGACG TGCTGATCGC GCAGGAGACG CTGGCCTTTC GCGAGTCGGA ACTCGATGCC ATCGGTCGCC AGCTGGAACA AACGGAGCGT CGCTTCGAGG TCGGCCTGAT CGCCAGCACG GACGTCAAGG AAGCCCAGGC ACAGCGCGAC CTCGCCGAGG CCGAACGGAT TGCCGCCGAG AATCAGCTGG ACGTGGCCCG CGAGCAGCTC GCGGTGATCA CCAACACCTA CTGGGACGAG CTCGACATCC TGCGCGAGGA CGCCGAACTG ACCCCGCCGG ACCCGGCCGA CCCACAGGCA TGGGTGGATA TCGCGCTGGA GAACAATCTG GAGCTGGCCG CCCAGCGCCT GACCACCGAG ACCGCCCGCG AACAGATTCA GCGCCAGCGC GCCGAGGGGC ACCCGCGACT GAACCTGAAC GCCTCGGTCA GCGAAAACCG TTTCCACGGC ATCGATGACG GCGGCACCCA GCAGGGAGTG GGCCCCTTCT TCAACGAGGG GACCGAGGCC CAGGTGGGCG TGCGCCTGGA GGTTCCGTTC TACACCGGCG GGCGCGTGAG CGCGCTCACC CGGCAGGCGC GCGAGGACTT CCAGGCCGCG CAGGAAGGGC AGTCGCTCGT TGAACGCCGC ACCACCCAGG ACACCCGCAA CGCCTACCTG TCGGTCATCG CGAACAGCTC GCGCGTGCGC GCCCTGGAGC AGGCGCTGAT CTCCACCCAG GCCGCATTCG AGTCGGCCGA GGCCGGATTC GAAGTCGGCA CGCGTACCCA GGTCGACGTC CTGCTGGCCT TGCGCGAGGT GTTCCGCGCC GAGCGCGACT ACGCCGAGGC CCGCTACGGC TTCCTGACCG ACTCGCTGCG CCTGCAACGC GCCGCCGGCC GCCTGAGTGT CGCGGACCTG GAATCGATCG ACCAGCTGCT GGAGCAATGA
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Protein sequence | MNRSAKRIFS TLATAGIALL VASPAPAASL LEVYERAATE DAELRAAEAE YRSVLERRPI ARSAFLPQIT GEAEAGAFYN DYRDQDSFDG RQTSFGVSLV QSLYDRRNFI ELTQADLEIA RAEAELDAAR QDLILRVSEA YFDVLIAQET LAFRESELDA IGRQLEQTER RFEVGLIAST DVKEAQAQRD LAEAERIAAE NQLDVAREQL AVITNTYWDE LDILREDAEL TPPDPADPQA WVDIALENNL ELAAQRLTTE TAREQIQRQR AEGHPRLNLN ASVSENRFHG IDDGGTQQGV GPFFNEGTEA QVGVRLEVPF YTGGRVSALT RQAREDFQAA QEGQSLVERR TTQDTRNAYL SVIANSSRVR ALEQALISTQ AAFESAEAGF EVGTRTQVDV LLALREVFRA ERDYAEARYG FLTDSLRLQR AAGRLSVADL ESIDQLLEQ
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