Gene TK90_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2385 
Symbol 
ID8808166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2503596 
End bp2504399 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID 
Productprotein of unknown function DUF500 
Protein accessionYP_003461611 
Protein GI289209545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.440615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.201549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGAC TGATCCATCT TTGCCTGACC GCGCTGGTGG TGGCTGCGCT GTCCGCCACT 
GCCCACGCCA ACCCGTTCAG CCGCGAGGTT GACCCGCAGG ACATCGTCGA TCGGGCGAAG
GTCACGCTGG AGCGTCTGGC CACGCACCCC GAATATGAAC ACCTGCAGGA AGATCTGCGT
ACCGCTCGAG GTGTCGTGAT CTTTCCGCGT ATCGGGCGTG GTGCCTTCCT GATCGGGGGC
TCCGGGGGCA TGGGTGTGTT CCTCGCCTGG GACGAGGACA AGGGCGACTA CTCACCGGTT
GCCTTCTATT CGCTGGGGTC GATCAGTTTT GGCATGCAGT TCGGGGGGGA TGCCGCCGAG
GTCGTGATGG TCGCACGTAC CCAGGATGCA GTTGATTCGA TGTTCGGTTC CGCCATTCGT
CTCGGCGCCG ACGCCTCCGT TGCCGCCGGT CCGGTCGGGG CCGGGCGTGG CTCCACCCCG
ACGGCCGACT TTCTGACCTA TTCCCGCTCG CGTGGGGCCT ACCTGGGGAT GAGCCTGTCC
GGCTCGCGCC TGACTGTGCG CGACGACTTC AACGAGGCGT ACTACGGCGA GGCGCAGCGG
CCGGTGCACA TCATCGAAAG CCGACGTGTG GATCACGCCG GGACGCGCGA GCTGCGTGAT
CTGCTGGCCT CGTTCCGTCA GTCCGGTGAG GCCGCCGAGC CGGAGAGCGG GAATGGTGCC
ATGCGCCCGG ATCAGACCCT GGACGAAGTG ACGCCGGGCG AGGGCGGCAT CCGCCAGGAC
GACTTCCAGA TCGAGAGCTT CTGA
 
Protein sequence
MQRLIHLCLT ALVVAALSAT AHANPFSREV DPQDIVDRAK VTLERLATHP EYEHLQEDLR 
TARGVVIFPR IGRGAFLIGG SGGMGVFLAW DEDKGDYSPV AFYSLGSISF GMQFGGDAAE
VVMVARTQDA VDSMFGSAIR LGADASVAAG PVGAGRGSTP TADFLTYSRS RGAYLGMSLS
GSRLTVRDDF NEAYYGEAQR PVHIIESRRV DHAGTRELRD LLASFRQSGE AAEPESGNGA
MRPDQTLDEV TPGEGGIRQD DFQIESF