| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2277 |
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| Symbol | |
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| ID | 8808057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2397440 |
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| End bp | 2400004 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003461503 |
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| Protein GI | 289209437 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0137658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC ACCTCGTCAT TGTAGAGTCG CCCGCCAAGG GCAAGACCAT CGAAAAATAT
CTCGGCCCGG ACTACCAGGT CATGGCCTCC TATGGCCATG TCCGCGACCT GGTCCCCAAG
GAAGGGGCGG TGGACCCGGA AAACGGGTTC CGCATGAAGT ACGACGTGAT CGAGCGCAGC
GAAAAGCAGA TCGAGGCGAT CGCCAAGGCT CTGAAGAAAT CCGATGACCT GATCCTCGCG
ACTGACCCCG ACCGTGAAGG CGAGGCAATC TCCTGGCATC TCTACGAGGT GCTGCGTGAC
CGCGGCCTGC TAGACGATCG TGGCGTGCAT CGGGTCGTGT TCCACGAGAT CACCAAGAAG
GCGATCCAGC AGGCGATCGA GGAACCGCGC GACCTGGCCA AGCCGCTGAT CGATGCCCAG
CAGGCGCGCC GCGCGCTGGA CTACCTGGTC GGCTTCAACC TCTCCCCGCT GCTGTGGCGC
AAGATCAAGC GCGGCCTGTC CGCCGGGCGC GTGCAAAGCC CGGCACTGCG CATGATCTGC
GAGCGCGAGA ACGAGATCGA GGCCTTCGTC CCGCGCGAAT ACTGGACCCT GGATGCGAAG
GTCGAGCGCC AGGAGCAGCC GTTCACCGCG CGCCTGACCT ACCTGGACGG CAACAAGCTG
GACCAGTTCG ACCTGAACAG CGCCGAACTC GCACATGACG CCCAGAAGCG CCTGACCGAG
GCCGCGAACG GCGAGCTGCG TGTCGCCAAG GTCGAGAAGA AGCAGCGCCG CCGCAACCCG
GCCGCGCCGT TCACCACCTC GACCCTGCAG CAGGAGGCCT CGCGCAAGCT GGGCTTCACC
GCATCGCGCA CCATGCGCAC CGCGCAGCAG CTGTACGAGG GGATCGATCT GGGCTCCGGC
GCGATCGGCC TGATCACCTA TATGCGTACC GACTCGGTGG CCCTGGCCGG CGAGGCGATT
GGCGAGATCC GCGGCCTGAT CGAGGAGCGC TATGGCGCCA ACAACGTCCC CGACAGCCCG
CGCCAGTACA AGACCAAGTC GAAGAACGCG CAGGAGGCCC ACGAGGCTAT CCGCCCGACC
TCCGTGCGCC GCCTGCCGAA CGAGGTCCGC GCCCGCCTGA GCAGTGACCA GGCCCGGCTG
TACGACCTGA TCTGGAAGCG CACCGTCGCC TGCCAGATGA TCCACGCGAC CTTCGACACC
GTGGCCGCCG ACCTGGTCCC GGGTGACAGC CGACACCAGT TCCGCGCCAC CGGCTCCACC
CTGGTCGACC CCGGCTTCAT CGCCGTCTAC CAGGAGGGCC GCGACGACGC GCAGGATGAC
GACGAGGACA AGCGCCTGCC GGAAATGGCC GAGGGCGACA CGGTCCAGCT GGAAGAGGTC
ACCGCCGACC AGCACTTCAC CGAGCCGCCG CCGCGCTACA CCGAGGCCAG CCTGGTGAAG
ACGCTGGAGG AATACGGCAT CGGCCGTCCG TCCACCTACG CCAGCATCAT CTCCACGCTG
CAGTCGCGCG AGTACGTGGA GATGGACGGC AAGCGCTTCA TCCCGACCGA CACCGGCCGG
ATCGTGAACA GCTTCCTGAC CCAGCACTTC GACCGCTACG TGGACTACGA CTTCACCGCG
AAGCTGGAAG ACGAGCTGGA CGCGATCTCG CGCGGCGAGA AGGACTGGGT CCCGGTGCTG
GAGGATTTCT GGGGCGACTT CCGCGACCGG GTGAAGGAGA AGGAAGAAAA CGTCACTCGC
GCCGAGGCCG TGCAGTCGCG CGAACTGGGC CCCGATCCGC AGAGCGGACG CCCGGTCAGC
GTGCGCCTGG GCCGTTTCGG CCCGATCGTG CAGATCGGCA CCAAGGACGA CGAGGAGAAG
CCGCGCTTCG CCGGCCTGCT GCCCGGGCAG AAGATGGACA AAATCACCCT CGACGAGGCG
CTGGAGCTAT TCAAGCTGCC GCGCGACCTC GGCGAGACGC CCGAGGGCGA GCCGGTGATG
GTCAACATCG GCCGCTTCGG ACCGTACGTG AAGTACGGCT CCAAGTACGC CTCCCTCGGC
CCGGACGACG ACGTCTGGAC CATCGAGCTG CCGCGCGCGC TGGAGATCGT CGCCGAGAAG
AAGAAGAAGG ACGCCGAACG CTTCATCAAG AGCTTCGACG AAGAGGGCAT CCAGGTCCTC
AACGGGCGCT ACGGCCCTTA CGTGACCGAC GGCAACAAGA ACGCCAAGAT CCCCAAGGAG
ACCGATCCCA AGTCCCTGAC GCTGGAACAG TGCCAGGAAC TGATCGCCGC CGCCCCGGAA
CGCAAGGGCC GCGGCCGCAA GGGGGCGGCC AAGTCGACCG GCAAGTCCTC CGGGAAGACC
GCCTCCAAGT CGTCGACCGC AAAGAAGACG ACCACGAAAA AGGCAGCCAC CACCAAGAAG
GCCGCCAGCA AGACGGGCAC GAAAAAGGCC ACCGCAAAGA AGACGAGCAC GTCGAAGAAG
GCCCCGGCGA AGAAGGCTTC GACCGCCAAG TCTGGTAGCG CGAAATCCGG CAGCGGCGAC
AGCCGCCTGA GTGCCCAGCC CTCCGGCGAC CGTGGATCCG AATAG
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| Protein sequence | MSKHLVIVES PAKGKTIEKY LGPDYQVMAS YGHVRDLVPK EGAVDPENGF RMKYDVIERS
EKQIEAIAKA LKKSDDLILA TDPDREGEAI SWHLYEVLRD RGLLDDRGVH RVVFHEITKK
AIQQAIEEPR DLAKPLIDAQ QARRALDYLV GFNLSPLLWR KIKRGLSAGR VQSPALRMIC
ERENEIEAFV PREYWTLDAK VERQEQPFTA RLTYLDGNKL DQFDLNSAEL AHDAQKRLTE
AANGELRVAK VEKKQRRRNP AAPFTTSTLQ QEASRKLGFT ASRTMRTAQQ LYEGIDLGSG
AIGLITYMRT DSVALAGEAI GEIRGLIEER YGANNVPDSP RQYKTKSKNA QEAHEAIRPT
SVRRLPNEVR ARLSSDQARL YDLIWKRTVA CQMIHATFDT VAADLVPGDS RHQFRATGST
LVDPGFIAVY QEGRDDAQDD DEDKRLPEMA EGDTVQLEEV TADQHFTEPP PRYTEASLVK
TLEEYGIGRP STYASIISTL QSREYVEMDG KRFIPTDTGR IVNSFLTQHF DRYVDYDFTA
KLEDELDAIS RGEKDWVPVL EDFWGDFRDR VKEKEENVTR AEAVQSRELG PDPQSGRPVS
VRLGRFGPIV QIGTKDDEEK PRFAGLLPGQ KMDKITLDEA LELFKLPRDL GETPEGEPVM
VNIGRFGPYV KYGSKYASLG PDDDVWTIEL PRALEIVAEK KKKDAERFIK SFDEEGIQVL
NGRYGPYVTD GNKNAKIPKE TDPKSLTLEQ CQELIAAAPE RKGRGRKGAA KSTGKSSGKT
ASKSSTAKKT TTKKAATTKK AASKTGTKKA TAKKTSTSKK APAKKASTAK SGSAKSGSGD
SRLSAQPSGD RGSE
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