Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2272 |
Symbol | |
ID | 8808052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2392845 |
End bp | 2393807 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_003461498 |
Protein GI | 289209432 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00775496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCAAA GCGACAAGGA TGTTCCAAGG CCGCGCGTGG TCTACGCTGG CACGCCGGAC TTCGCGGTCC CCGCGCTGGA GGCCCTGATC GAGTGCGGCC CGCGGCCCGT GGCCGTGTAC ACCCAGCCGG ATCGCCCGGC GGGGCGTGGG CGTCAGCTGC GTCCGAGCCC GGTCAAGGTC GCCGCCGAGG CGGCCGGTAT CCCGGTGCGG CAGCCGGAAT CCCTGAAATC GCCCGAGGCC CAGGCCGAAC TGGCCACCTG GCGCCCGGAT ATCCTGATCG TCGCGGCCTA CGGGCTGATC CTGCCGCGCG CGGTGCTGGA AATCCCCCGC CGGGGCGGGC TGAACATCCA CGCTTCGCTG TTGCCCCGCT GGCGCGGCGC CGCACCGATC CACCGCGCGA TCCTTGCCGG CGATTCCGAG ACCGGGGTCT GCCTGATGCA GATGGCGCCC GGCCTGGACA CGGGGCCGGT GCACGCCTGT CGCTCGACCC CGATCACGGC GACGACGACC ACCGGCGAGC TGCACGACAC GCTGGCCACA CTGGGCGCCG AGCTGCTGCT GGAGTGGCTG CCCGAGATCC TCGCGGGGCG TTCGCAGCCG GAACCCCAGG ACGATGCCGA CGCGACCTAC GCGCACAAGC TGGAGAAGAA CGAGGCCTGG CTGGACTTTG CCCGCCCGGC GGTGGAACTG GATCGCCAGG TGCGGGCCTT CAACCCCTGG CCGGTCGCCC AGGCGCGCTG GGGCGAGCAG GTGATCCGCG TGCATGCCGC GCGCCCGCTG CCCGGCCCGG CGGACCCGGA GCCGGGCACC ATCCGCGCCG CGGGCCGCGA CGGGGTGGAA GTCGGCACGG GGGAGGGCCG GCTGCGTCTG GAGACCGTGC AGCTGCCGGG CAGGCGCCCG GTTGCGGCCG CGGACTGGGC CAACACTACG GCGCTGGCGG GGCAGCGCCT CGCGGGGCGC TAG
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Protein sequence | MTQSDKDVPR PRVVYAGTPD FAVPALEALI ECGPRPVAVY TQPDRPAGRG RQLRPSPVKV AAEAAGIPVR QPESLKSPEA QAELATWRPD ILIVAAYGLI LPRAVLEIPR RGGLNIHASL LPRWRGAAPI HRAILAGDSE TGVCLMQMAP GLDTGPVHAC RSTPITATTT TGELHDTLAT LGAELLLEWL PEILAGRSQP EPQDDADATY AHKLEKNEAW LDFARPAVEL DRQVRAFNPW PVAQARWGEQ VIRVHAARPL PGPADPEPGT IRAAGRDGVE VGTGEGRLRL ETVQLPGRRP VAAADWANTT ALAGQRLAGR
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