| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2254 |
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| Symbol | |
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| ID | 8808034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2371203 |
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| End bp | 2373260 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003461480 |
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| Protein GI | 289209414 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.816502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.58095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCAGTG CTTCCCTGAA TCCGCAACAG CAGGCGGCCG TGACCACCAC GGACCGCCCC
CTGCTGGTGC TGGCCGGAGC GGGCTCGGGC AAGACCCGCG TGATCACGGA GAAGATCGCG
TACCTGATCG AGCAGCGCGG GCTCGAGGCC CGCCGGATTG TCGCGATCAC CTTCACCAAC
AAAGCCGCGC GCGAGATGCG CGAACGCGTC CAGGGGCGCC TGTCGAAGGA ACAGGCACGC
GGGCTCGGCG TCTCCACCTT CCACACCTTC GGGCTGAACT TCCTGCGCCG CGAACTGGCC
GCGTCCGGAC TGCGTGCGGG CTTCTCCATC CTCGACCCGG GCGACTGCCG CTCGCTGCTG
CGCGAGATCA CCTACCGCGA CGATACCGGC TCCGAGGTCG ATGCCCTGAT CGGCCATATC
AGCCGCTGGA AGAACGACCT GATGACGCCG GAGGAGGCGC TGCACGAGGC CAGCCAGATG
CGCGACGCCC CGGAGGCGAT CGCCGCGGCC AACCTCTACC CGCGCTACGA GGATGCCCTG
CGCGCCTACA ACGCGGTGGA CTTCGACGAC CTGATCAAGC GTCCGGTGGA CTGCCTGCGC
GTGGATGCCG ATCTGCGCAA CCGCTGGCAG GACCGCATCC GCCACCTGCT GGTGGATGAA
TACCAGGACA CCAACGCCGC GCAGTACCAG CTGGTGCGCC TGCTGGTAGG CGTCAGCGAC
GGCCTGACCG TGGTCGGCGA CGACGATCAG TCGATCTACG CCTGGCGCGG GGCCCGGCCG
GAGAATCTCG CACGCCTGCA GCAGGACTTC CCGCGTCTGG AGGTGATCAA GCTGGAGCAG
AACTACCGCT CCACCAACCG CATCCTGCAC ACCGCGAACG CGCTGATCGC CAACAACCCG
CACGTGTTCG AGAAACGCCT GTGGAGTGCA CTCGGCGAGG GCGAGAAGAT CGAGGTGATC
GGCTGCTCTG ACGCCGATAC CGAGGCCGCC CGCGTGGTCT CCGAGCTGAT GCGCCGTCGC
TTCCGCCTGA ATGCGACCTG GGGCGACTTC GCGATCCTCT ACCGCAGCAA CCACCAGTCA
CGGCTGTTCG AGAAGCTCCT GCGGGAGCAG GGCATCCCCT ACCGCCTGAG CGGCGGGCAG
TCGTTCTTCG AGAAGGCCGA GATCAAGGAC CTGGTCGCCT ACCTGCGCCT GCTTGCGAAC
CCGGACGACA ACACCGCCTT CCTGCGCGTG GTCAACGTGC CGCGCCGCGA GATCGGGCCG
GCGACCCTGG AAAAGCTCGG CCACTACGCC AACCAGCGTG GGACCTCGCT GCTGCAGGCC
GCACGTGGTG CCGGCCTGTC CGAATACATG GATGCCCGCG CCCAGGCGCG GCTGGAACGC
TTCACCGACT GGGTCGACGG CTTCCAGCGC CGGGGCACGG AGGAGGCCCT CGACGCCCTG
CTGCGCGCCC TGGTCGAGGA CATCGACTAC GAATCCTGGC TGCTGGAAAA CAGCCCCAAC
CCGCGCGCCG CCACACGGCG CATGGAGAAC GTGCGCGAGT TCATCGACTG GGTCGGGCGC
ATGGGCGGCG GCAGCACCAG CGCCGAATAC GGCGACGACG AGGCCGAGGA TGACCGAGGC
ATGGACCTAG CCGACATCGT CAACCGCATC AGCCTGATGG ACATCCTCGA CCGCAATCGC
GAATCCCAGG ACGGCGACGA GTCGGTACAA CTGCTAACCC TGCACACCGC CAAGGGCCTG
GAGTTTCCGC ACGTCTGCCT CGTGGGTTTC GAGGAAGAGC TGCTGCCGCA CCGGGTCAGC
GTCGAGGACG ACTCCATCGA GGAGGAGCGC CGCCTGGCCT ATGTCGGCCT GACCCGCGCC
CAGCAGACCC TGCTGATCAC CTACGCCCAG CAACGCTCCC GCTACGGCGA GACCATCGAC
TGCGAGCCCT CGCGCTTCCT CGACGAACTC CCCGAGGAAC ACCTCGAATG GCCGGACGCC
AAACCGCCGG ACCCCGAGAC CCAGCAACTC ACCGCCCGCG CCCACCTCGC CGGCCTGAAG
GCCATGCTCG GCAAATAG
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| Protein sequence | MISASLNPQQ QAAVTTTDRP LLVLAGAGSG KTRVITEKIA YLIEQRGLEA RRIVAITFTN
KAAREMRERV QGRLSKEQAR GLGVSTFHTF GLNFLRRELA ASGLRAGFSI LDPGDCRSLL
REITYRDDTG SEVDALIGHI SRWKNDLMTP EEALHEASQM RDAPEAIAAA NLYPRYEDAL
RAYNAVDFDD LIKRPVDCLR VDADLRNRWQ DRIRHLLVDE YQDTNAAQYQ LVRLLVGVSD
GLTVVGDDDQ SIYAWRGARP ENLARLQQDF PRLEVIKLEQ NYRSTNRILH TANALIANNP
HVFEKRLWSA LGEGEKIEVI GCSDADTEAA RVVSELMRRR FRLNATWGDF AILYRSNHQS
RLFEKLLREQ GIPYRLSGGQ SFFEKAEIKD LVAYLRLLAN PDDNTAFLRV VNVPRREIGP
ATLEKLGHYA NQRGTSLLQA ARGAGLSEYM DARAQARLER FTDWVDGFQR RGTEEALDAL
LRALVEDIDY ESWLLENSPN PRAATRRMEN VREFIDWVGR MGGGSTSAEY GDDEAEDDRG
MDLADIVNRI SLMDILDRNR ESQDGDESVQ LLTLHTAKGL EFPHVCLVGF EEELLPHRVS
VEDDSIEEER RLAYVGLTRA QQTLLITYAQ QRSRYGETID CEPSRFLDEL PEEHLEWPDA
KPPDPETQQL TARAHLAGLK AMLGK
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