Gene TK90_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2188 
Symbol 
ID8807967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2302454 
End bp2303224 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID 
Productprotein of unknown function DUF1342 
Protein accessionYP_003461414 
Protein GI289209348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAAT TACTCACCTT CGAACAACCG CTGCACGAAC GCGTGCGACT GCTGTTGCGC 
CTGGAGGCGC TGGCTCAGCG GTTCGGGGAC GCCCTGGAGT CCGGCCGGCC TTTTGACCAT
CACGAGGCCC TGGTCTCGCT GGTCGACATC TATGCCCTGG TCACCCGCGT CGACATCAAG
CGCGAATTGA TGGGCGAGAT CGAGCGCCAG ACTGCCAACC TCAACCGACT CACGCACCAG
CCGGGCGTCG ACCCGGAGCG TTTCACCGAG ACCATGCAGG CGCAGAAACG CCTGCACACC
GCCCTGGAAG AACAGGCCGG GTCGCTGGAT CATCGAGTGC GTGGCAACGA ATTCTTCAAC
AGCGTGCGCC AGCGCATGGC GCTACCCGGC GGGGCCTTCG ATTTCGACCT GCCGATCTAC
CATCACTGGC TGGCCCAGAG TTCCCCGGAG CGCACCGCAC TGTTGCTGGA ATGGTTCGAA
CCGTTGAACA CGGTTGCCGA GGCAACCGTC CAGGTCCTGT CCTATATGCG CCGATCCGGG
CGCTCGGAGT CCGCGATCGC CGAAGACGGC TATTTCGAAC GCAGCCTGGA CACGAGTCAT
GCATGGCAAC TGATCCGGGT CAGTGTCGAT CCCGATCTGG GGTATTACCC GGAGATCAGC
GCGGGACGCC AACGCTTCAC GGTGCGTTTT TTCTCACCCG AGGATTTCCG CAGCCGCCCC
ATCCCCGCCG CACAGGACAT TGAATTCCAG CTGTGCTGCT GCGCCTTGTA A
 
Protein sequence
MTQLLTFEQP LHERVRLLLR LEALAQRFGD ALESGRPFDH HEALVSLVDI YALVTRVDIK 
RELMGEIERQ TANLNRLTHQ PGVDPERFTE TMQAQKRLHT ALEEQAGSLD HRVRGNEFFN
SVRQRMALPG GAFDFDLPIY HHWLAQSSPE RTALLLEWFE PLNTVAEATV QVLSYMRRSG
RSESAIAEDG YFERSLDTSH AWQLIRVSVD PDLGYYPEIS AGRQRFTVRF FSPEDFRSRP
IPAAQDIEFQ LCCCAL