| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2186 |
|---|
| Symbol | |
|---|
| ID | 8807965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2300797 |
|---|
| End bp | 2301687 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Prepilin peptidase |
|---|
| Protein accession | YP_003461412 |
|---|
| Protein GI | 289209346 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.295989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACATTG GTCAGGGCTT CCCTAGGATG CTCGGCACGG AAGAGCTCCT GTCGCCACCC
TGGGCAATCG CGGTCGCAGC GATTTTCGGG CTGCTAATCG GCAGTTTTCT GAACGTGGTC
ATCGCCCGGC TGCCGGTGAT GCTGGAGCGC GGCTGGAATG CCGAGGCACG CGCGATCCTG
GAGCAGGAGC CCCCAGCGGA CGACGTCCCG TTCGATCTGC TGCGTCCACG CTCGCGCTGC
CCCCACTGCG AGCGACCGAT CCGTGCGTAC GAGAACATCC CCGTGCTCAG CTTCCTCTGG
CTGCGCGGAC GCTGCCCGGG CTGCGGCACA GCCATCAGCT GGCAGTACCC GCTGGTCGAG
ATCCTCACCG CAGTCCTGTT TGCCCTGACC ATCTGGCACT TCGGACCCGA CACGACAGCG
CTGCTGGCGC TGATCTTCAC CGGCGTCCTG ATCGCCGCCG CCGGGATCGA CGCGCGCACC
ACCCTGCTCC CGGACCAGCT GACCCTGCCA CTGCTCTGGC TGGGGCTGCT GGTCAATATC
CCGGGCACCT TCACCGATCT GCAGTCGGCC GTGATCGGAG CGGCCGCCGG TTACCTGGTG
CTGTGGCTGA TCTTCCACGG CTTCCGCCTG GCCACCGGCA AGGAGGGCAT GGGGTACGGC
GACTTCAAGC TGCTCGCCGC GCTGGGCGCA TGGCTCGGCT GGCAGGCCCT GCCGGTAATC
CTGCTGCTGG CCTCGCTGGT CGGAGCGGTG GTCGGCATCC TGCTGATCCT GCTGCGCGGG
CGCGACCGCA ACATCCCGAT CCCGTTCGGG CCGTATCTGG CAGCCGCCGG GTGGCTGGCG
CTGATCTGGG GCGATACGCT GGTGGCGTTC TACTTCCCAC AGGGGCTCTA G
|
|---|
| Protein sequence | MHIGQGFPRM LGTEELLSPP WAIAVAAIFG LLIGSFLNVV IARLPVMLER GWNAEARAIL
EQEPPADDVP FDLLRPRSRC PHCERPIRAY ENIPVLSFLW LRGRCPGCGT AISWQYPLVE
ILTAVLFALT IWHFGPDTTA LLALIFTGVL IAAAGIDART TLLPDQLTLP LLWLGLLVNI
PGTFTDLQSA VIGAAAGYLV LWLIFHGFRL ATGKEGMGYG DFKLLAALGA WLGWQALPVI
LLLASLVGAV VGILLILLRG RDRNIPIPFG PYLAAAGWLA LIWGDTLVAF YFPQGL
|
|---|
| |