Gene TK90_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2170 
Symbol 
ID8807945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2279066 
End bp2279377 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content60% 
IMG OID 
Productribosomal protein S10 
Protein accessionYP_003461396 
Protein GI289209330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00128539 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.372781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACC AGCGTATCCG AATTCGCCTG AAGGCCTTTG ATCATCGACT GATCGACCGT 
TCCGCGGCCG AGATCGTCGA GACCGCGAAG CGCACGGGCG CCCGCGTGAA GGGGCCAATC
CCGCTCCCGA CCAAGCGTGA GTCGTACACG GTCCTGATCT CGCCGCACGT CAACAAGGAC
GCGCGAGACC AGTACGAGCT GCGTACGCAC AAGCGCTTGA TGGACATCCT CGATCCGACC
GACAAGACCG TGGATGCCCT GATGAAGCTG GATCTCGCCG CCGGCGTGAA TGTTCAGATT
CGACTTAACT AA
 
Protein sequence
MANQRIRIRL KAFDHRLIDR SAAEIVETAK RTGARVKGPI PLPTKRESYT VLISPHVNKD 
ARDQYELRTH KRLMDILDPT DKTVDALMKL DLAAGVNVQI RLN