| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2142 |
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| Symbol | |
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| ID | 8807917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2262973 |
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| End bp | 2265822 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003461368 |
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| Protein GI | 289209302 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.364139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCA TCAGCATCCG CGGGGCCCGC ACCCACAACC TGAAGAACAT TGATCTCGAC
CTGCCGCGCG ACCGGCTGAT CGTGATCACG GGCGTGTCCG GCTCCGGCAA GTCGTCGCTG
GCCTTCGACA CCCTGTTTGC CGAGGGACAA CGCCGCTACG TGGAGAGCCT GTCCACCTAC
GCCCGCCAGT TCCTGTCGAT GATGGAAAAG CCGGACGTGG ATCAGATCGA GGGGCTCTCC
CCGGCGATCT CCATCGAGCA GAAGAGCACC TCGCACAACC CGCGTTCCAC CGTCGGCACC
ATCACCGAGA TCTACGACTA CCTGCGCCTG CTGTTCGCGC GTGCGGGCGA GCCGCGTTGC
CCCGAACACG GTGAGACCCT GGCGGCCCAG ACCATCTCGC AGATGGTGGA TCAGGTGCTG
GATCTTCCCG AGGGCGAGAA GGTGATGCTG CTGGCCCCGA TCGTGCGCGG ACGCAAGGGC
GAGCACCACA AGCTGCTGGA GTCCATGCGC GCCCAGGGGT ACCTGCGCGC CCGCATCAAC
GGCGAGATCC ACGACCTCGA CGCCTTGCCC GCGCTGGACC CGAAGCGCAA GCACAACATC
GAGATCGTGA TCGACCGCTT CAAGGTCCGC GAGGACCTGC GGAGCCGCCT GGCCGAGTCC
TTCGAGACGG CGACCGAACT GGCCGACGGG CTGGCGCTGA TCGCCTGGAT GGACGAGCCC
GAACGCGAGC CAATGATCTT TTCCGCGCGC TATGCCTGCC CCGTCTGCGG CTATGCGCTG
CGCGAGCTGG AGCCCCGGCT GTTCTCGTTC AACAATCCGG CCGGCGCCTG CCCCACCTGT
GATGGCCTCG GCGTGCGCCA GTACTTCGAC CCGGAGCGGG TCGTCTCGCA ACCCGAACTG
AGCCTGGCCG GCGGCGCAGT GCGTGGATGG GACCGGCGCA ATGCCTGGTA CTTCAGCCTC
CTGAACAGCC TCGCCCGCCA TTACGGCTTT GACGTCGAGA CGCCGTGGCA GGAGCTGCCG
GCCGAGGTCC GCGCCGTGGT GCTGCACGGC TCCGGCAAGG AGAAGGTCAA GCTGTCGACG
CCGGCCGCGA ATGGCCGCCT GCGTACCGAC GAGCGCGTGT TTGAAGGAGT GATCCCGAAT
CTGGAGCGGC GCTACCGCGA GACCGACTCC GCCGCCGTAC GCGAGGAGCT AGGGCGCTAT
CTGGCCGAAC AGGCCTGCCC CGAGTGCCAC GGCACGCGGC TGAACTCCGC GGCGCGTCAT
GTGTTCGTCA ATGACCTGAC ACTGCCCGAG GTCACGCACA TGAGCGTGGC CGACGCACGG
GCCTTCTTCG CTGAGCTGCG CCTGCCGGGC CGCTTCGCCC AGATCGCGGA GAAGATCGTG
CGCGAGATCG GCGCACGCCT GGGCTTCCTG AACGATGTCG GGCTCGACTA CCTGACCCTG
GACCGCTCGG CCGACACCCT GTCCGGCGGC GAGGCCCAGC GCATCCGGCT GGCCTCCCAG
ATCGGGTCGG CCCTGGTAGG GGTGATGTAC ATCCTCGACG AACCCTCGAT CGGCCTGCAC
CAGCGCGACA ACGAACGCCT GTTGAAGACT TTGTGTCACC TGCGGGACCT CGGCAACACC
GTGGTGGTCG TGGAGCACGA CGAGGATGCG ATTCGCGCGG CGGATCATGT CGTCGACATC
GGCCCCGGTG CGGGCCGCCA TGGCGGCCAG GTCGTGGCCG CCGGCACCCC GGACGAGGTG
GCCCGCACAC CGGACTCCCT GACTGGGGCC TATCTCACCG GTACGCGCGC GATCGCCGTC
CCGGAGAAGC GCACCGAACC GGACCCCGAA CGCGAGATCC GCGTGATCGG CGCGCGCGGC
AACAACCTGA AGGGCGGAGA CTTCGCGTTT CCCACGGGCC TGCTGACCTG CGTCACCGGG
GTCTCGGGCT CCGGCAAGTC GACCCTGGTC AACAACACGC TCTACCCGGC CGTCGCCGTG
GCCCTGCATG GCGGGCGCCA CACGATCGCG CCGCACGAGC GCATCGACGG CCTCGAACTG
ATCGACAAGG TCGTCGACAT CGACCAGAGT CCGATCGGCC GCACGCCGCG CTCGAACCCG
GCGACCTACA CCGGCCTGTT CACCCCGATC CGCGAGCTGT TTGCCGCCAC CGCCGAGGCC
CGCTCGCGCG GCTACAAGCC AGGGCGCTTC TCGTTCAACG TGCGCGGCGG CCGCTGCGAG
GCCTGCCAGG GAGATGGCGT GATCAAGGTG GAGATGCACT TTCTTCCGGA TGTCTTCGTC
CCCTGCGACG TCTGCAAGGG CAAGCGCTAC AACCGCGAGA CCCTGGAGGT CCGGTACAAG
GGCAAGAGCA TCCACGAAGT GCTGGAGATG ACCGTCGAGG AGGCCCTGGA GTTCTTCCAG
CCGGTCCCCG TGATCCATCG CAAGCTCGAG ATGCTGATGG AGGTCGGGCT GTCCTACATC
CAGCTCGGTC AGAACGCCAC CACGTTGTCC GGTGGCGAGG CCCAGCGCAT CAAGCTCGCA
CGCGAGCTGT CCAAACGCGA TACCGGCCGC ACCCTGTACA TCCTCGACGA GCCCACGACC
GGCCTGCACT TCGAGGACAT CGCCCAGCTC TTGCGGGTGC TCCACCGCCT GCGCGACCAC
GGCAACACGA TCGTCGTGAT CGAGCACAAC CTCGACGTGA TCAAGACCGC CGATTGGCTG
ATCGACATTG GACCGGAGGG CGGTAGCGGT GGTGGCGAGC TGCTCGTCGC GGGCACGCCC
GAGGCGGTGG CTGGCACTCC AAGCAGCCAC ACGGGGCGCT TCCTCGCTCC TTTGCTGGGG
ACGCAGCAAA GGAGCGCCGC TTCCGCCTGA
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| Protein sequence | MDSISIRGAR THNLKNIDLD LPRDRLIVIT GVSGSGKSSL AFDTLFAEGQ RRYVESLSTY
ARQFLSMMEK PDVDQIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LFARAGEPRC
PEHGETLAAQ TISQMVDQVL DLPEGEKVML LAPIVRGRKG EHHKLLESMR AQGYLRARIN
GEIHDLDALP ALDPKRKHNI EIVIDRFKVR EDLRSRLAES FETATELADG LALIAWMDEP
EREPMIFSAR YACPVCGYAL RELEPRLFSF NNPAGACPTC DGLGVRQYFD PERVVSQPEL
SLAGGAVRGW DRRNAWYFSL LNSLARHYGF DVETPWQELP AEVRAVVLHG SGKEKVKLST
PAANGRLRTD ERVFEGVIPN LERRYRETDS AAVREELGRY LAEQACPECH GTRLNSAARH
VFVNDLTLPE VTHMSVADAR AFFAELRLPG RFAQIAEKIV REIGARLGFL NDVGLDYLTL
DRSADTLSGG EAQRIRLASQ IGSALVGVMY ILDEPSIGLH QRDNERLLKT LCHLRDLGNT
VVVVEHDEDA IRAADHVVDI GPGAGRHGGQ VVAAGTPDEV ARTPDSLTGA YLTGTRAIAV
PEKRTEPDPE REIRVIGARG NNLKGGDFAF PTGLLTCVTG VSGSGKSTLV NNTLYPAVAV
ALHGGRHTIA PHERIDGLEL IDKVVDIDQS PIGRTPRSNP ATYTGLFTPI RELFAATAEA
RSRGYKPGRF SFNVRGGRCE ACQGDGVIKV EMHFLPDVFV PCDVCKGKRY NRETLEVRYK
GKSIHEVLEM TVEEALEFFQ PVPVIHRKLE MLMEVGLSYI QLGQNATTLS GGEAQRIKLA
RELSKRDTGR TLYILDEPTT GLHFEDIAQL LRVLHRLRDH GNTIVVIEHN LDVIKTADWL
IDIGPEGGSG GGELLVAGTP EAVAGTPSSH TGRFLAPLLG TQQRSAASA
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