Gene TK90_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2078 
Symbol 
ID8807853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2198223 
End bp2198531 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003461305 
Protein GI289209239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00289353 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGAAC ACGGCATTGG CGATGAGGAA ATCGCGAGGG CCAAAGTTCT CTTCGAAGCA 
CGAAGCATAT TTGGCGCACT CGCGGGCCTT TGGGGCTGGG TTGCACTGTA CGCCGGCGCG
GCCCTGATCA ATCGAGCGTA TCAAAGGGCG CCGCTGGCGA TCAGAGCGGG GCTGATCGCG
GGGATTCTGG CCGTGGCGGC CATTCCGGGT GCCGGCCTGA CACTCGCGAG CTATCCCGTC
GCAACGTCGG CACTGCTGTT CGCTATATGG TGGCTGAACC CCGTCGGCGA GAAGACCGGA
ACGATTTGA
 
Protein sequence
MREHGIGDEE IARAKVLFEA RSIFGALAGL WGWVALYAGA ALINRAYQRA PLAIRAGLIA 
GILAVAAIPG AGLTLASYPV ATSALLFAIW WLNPVGEKTG TI