Gene TK90_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2035 
Symbol 
ID8807810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2157422 
End bp2158261 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content67% 
IMG OID 
Productouter membrane assembly lipoprotein YfiO 
Protein accessionYP_003461262 
Protein GI289209196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.894464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTCTG CCCCGAACCT GCTGCGTCTG CTGGCCGTAC TGCTCCTGGC GCTCATGATC 
GCCGGTTGCG CCGGCCGCGA AGACCCGACT CTTGGCTGGT CGGCCAGCCA GCTCTACGGC
GAGGCCAAGA ACGCGCTGAA CGAGGGCAAT TACGACCAGG CCGTTGAATA CTACGAGAAA
CTCGAGGCCC GCTATCCGTT CGGCCGCTAC GCCCAGCAGG CGCAGATCGA AATCCCGTAT
GCCTATTACA AGGCCCGCGA GCCGGAGGCC GCCATCGCCG CGGTGGACCG CTTCATCCAG
CTCAACCCGC GCCACCCGAA TCTGGATTAT GCCTACTACC TGCGCGGGCT GATCAATTTC
AACCGCCAGC AGGGCTTCCT TGCCAACCTG TTCCCGCGTG ACCCGGCGGA GATGGACCCC
GAGCCCTTCG AGCAGGCCTT CCAGGATTTC GACCGCCTGA TTCGAGAGTT CCCGGACAGT
CGCTACGCGC AGGACTCCTA CCTGCGGATG GTCTACATCC GCAACGCGCT GGCCGCCTAC
GAACTGCGCG TGGCCGAGTT CTACATGGAG CGCACCGCCT GGGTGGCGGG CGCCGAGCGC
GCGCGCCACG TGCTGGCCAC CTATCCCGGT GCCGAGGTCC AGCCGCAGGC CCTGGGTGTG
CTGTGGCGCG CCTACACCGA GCTGGGGCTC GAGGACTATG CCGACGCGAC CATGCAGGTC
CTGGAGCTGA ACTACCCCGA CGCGGCTGTC GCCGTACGCG CCGGCGAGCC GATCGAGATG
CGCGAGCCGC GCGGCGGCCT GTGGCGCGTG TTCGACCGCC TGCCGTTCTT CACGAACTGA
 
Protein sequence
MISAPNLLRL LAVLLLALMI AGCAGREDPT LGWSASQLYG EAKNALNEGN YDQAVEYYEK 
LEARYPFGRY AQQAQIEIPY AYYKAREPEA AIAAVDRFIQ LNPRHPNLDY AYYLRGLINF
NRQQGFLANL FPRDPAEMDP EPFEQAFQDF DRLIREFPDS RYAQDSYLRM VYIRNALAAY
ELRVAEFYME RTAWVAGAER ARHVLATYPG AEVQPQALGV LWRAYTELGL EDYADATMQV
LELNYPDAAV AVRAGEPIEM REPRGGLWRV FDRLPFFTN