Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2018 |
Symbol | |
ID | 8807793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2140448 |
End bp | 2141185 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | protein of unknown function DUF28 |
Protein accession | YP_003461245 |
Protein GI | 289209179 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.687235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCC ACAGCAAGTG GGCGAACATC CAGCATCGCA AGAACGCCCA GGACGCCAAG CGCGGCAAAC TCTTTACCAA GCTGATCCGC GAGATCACCG TCGCTGCCCG GCAGGGCGGG TCCGACCCCG AGACCAATCC GCGCCTGCGC CTGGCGATCG ACAAGGCGCT CGGCGCCAAC ATGACGCGGG ATACCATCGA GCGCGCGGCC AAGCGCGGCG CTGGCGAGAC CGACGGGGCC GCGATGGAGG AGATCCGCTA CGAGGGCTAT GGCCCGGGCG GCGCGGCGAT CCTGGTCGAC TGCATGACCG ACAATCGCAA CCGGACCGTG GCCGAGGTGC GTCACGCCTT CTCCAAGATG GGTGGCAACC TGGGGACCGA TGGCTCGGTG GCCTACCTGT TCCAGAACAA GGGCGTGATT CGTTTTGCGC CGGGGCTGGA CGACGAGACG GTCATGGAGG CCGCGCTAGA GGGTGGGGCC GAGGACGTGC AGGTCGAGGA CGACGGCGCG ATCGAGGTGA TTACCGAGCC CGATACCTAT CAGGACGTGC GCCAGGCGCT GCTGGACCGA GGGCTGGAGC CGGAGAGCTC GGAGGTCACC TGGCGCCCGG AGACCCTGTC GCCACTGGAT GCGGAGACCG CCGAATCCGT GCTGAAACTC CTGGAGATGC TGGACGACCT GGATGACGTG CAGAACGTCT TTACCAACGC CGACTTCCCG GAAGGCGTGG GGCAGTAG
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Protein sequence | MAGHSKWANI QHRKNAQDAK RGKLFTKLIR EITVAARQGG SDPETNPRLR LAIDKALGAN MTRDTIERAA KRGAGETDGA AMEEIRYEGY GPGGAAILVD CMTDNRNRTV AEVRHAFSKM GGNLGTDGSV AYLFQNKGVI RFAPGLDDET VMEAALEGGA EDVQVEDDGA IEVITEPDTY QDVRQALLDR GLEPESSEVT WRPETLSPLD AETAESVLKL LEMLDDLDDV QNVFTNADFP EGVGQ
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