| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2001 |
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| Symbol | |
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| ID | 8807775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2125652 |
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| End bp | 2127823 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003461228 |
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| Protein GI | 289209162 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTG GGCAGCCAGC CGTGCCCGGG GCCGCATCGC CGGTTCCCGG TGACTCGACC
CGATTCCTGA TCAGCGATCT ATGTTCCGAG CTCGAGTCTT ACCTCGAGCC GGACGAAGTC
GAGGAGGTCT ATCGCGCCTA TCTGCTGGGC GCGGAGGCCC ACGAAGGTCA GACCCGCAAG
ACCGGCGAGC CGTACATCTA CCACCCCCTG GCCGTGGCCC GGACCATGGC CGAGATGCGG
ATGGACCACA AGGCCATCTG TGCCGCGATC CTCCATGACG TCATGGAGGA TACCGCCACC
AGCAAGGATC GCATCCACGC CGAGTTCGGC GAGGAAGTGG CCGAGCTGGT CGATGGCGTC
TCCAAGCTCA CCCACCTGCA GTTCCAGTCC AAGGCCGAGG CGCAGGCGGA GAATTTCCGC
AAGATGATGC TGGCGATCAC CCGCGATATC CGGGTGATCC TGATCAAGCT GGCCGACCGC
CTGCACAACA TGCGCACCCT GGGCGTGATG CGCCCGGACA AGCGCCGCCG CATCGCCAAG
GAAACCCTGG AGATCTACGC GCCGATTGCC CAGCGCCTGG GGATGAACGC GATCCGCCGC
GAGCTGGAGC AGCTCGGCTT TTCCGCCAAG CACCCCTGGC GGGCCGCGGT CCTGGAACGC
GCCGTGCAGC GGGCCGGGGG CAACCGGCGC GAACCGATGA AGAACATCGA ACAGGCGATC
TGCTCGCGCA TGGAGGCGGC CGGGATCGTC GGGCGAATCT CCGGGCGCGA AAAGAGCCTG
TACAGCATCT ATCGCAAGAT GCGCGACAAG CACCACTCGT TCGAGGAGGT GTTCGACGTC
TTCGCGATCC GCATCATCGT CGACGATGTC GACACCTGCT ATCGCTCGCT GGGTGTGGTG
CACAACCTCT ACAAGCCGGT GCCGGGGCGC TTCAAGGACT ACATCGCGAT CCCCAAGTCG
AACGGCTACC AGTCGCTGCA TACCATCCTG TTCGGCCCGC AGGCCATCCC GATCGAGGTG
CAGATCCGCT CCACCGAGAT GGATCGCGTG GCCGAGAGCG GGATCGCCGC GCACTGGCAG
TACAAGGCCG GGGGCGAGTC CGCGCGCACC GCGCAGAGCC GGGCCCGCGA GTGGCTGAAG
GATGTACTGG AGATCCAGAA CAGCGTCGGC AACTCCATCG AGTTCCTGGA AAACGTAAAG
GTCGATCTGT TCCCGGACGA GGTCTACACC TTCACCCCCG AGGGCGACAT CCTGGTTCTA
CCGCGCGATG CGACACCGAT CGATTTTGCC TACGCGGTGC ACTCCGACGT CGGCAACCGC
TGCGTGGCGG CGAAGATCGA TCGCCAGCTG GCACCGCTTT CGGTGCGCCT GCAAAGCGGA
CAGACGGTGG AGATCGTCAC CGCCCCCGGC GCGCGCCCCA ACCCGGCCTG GCTGTCCTTC
GTTGTCACTG GCAAGGCCCG GTCCGGCATC CGGCATTGCC TGAAGTCGAT GCAGTCGGAC
GAGGCCCGTG CCCTTGGCGA ACGCCTGCTG GAGAAGGCCC TGAGCGCACT GGACACCTCC
CTCAAGCAGA TCTCGCCGGC GCGCCTGGAT CAGCTGCTCG ACGCGATGCA GCTACAGGAC
CTGGACAGCC TGCTGGTGGA TATCGGGCTG GGCAACCGCA TGGCCTCGCT GGTCGCACGC
CAGATGGTGG GCAAGGAGAG CGCGGAGGCC GACAACACTA CCCAGACCAC GCTGGCGGTC
AAGGGTACCG AGGGTCTGGT GCTGAACTAT GCCCGCTGTT GCCACCCGAT CCCCGGCGAC
CCGATTATCG GCCAGCTGAG CGCGGGTCGT GGCCTTGTGG TGCACCGGGA GAGCTGTCGT
AACGTGCTGC ACGAGAGCCG CGACCGGGCG GACAAGACAA TCGCGCTCGA ATGGTCACAC
GAGCCGGAAC TGCAGTTCAC CGCGGCGGTG CGCACCCGCA CCGCCAACCG GCGCGGTGCG
CTGGCCGACA TGGCGGCCGT GATCGCCGAC AACGGCTCGA ATATCGAGCA CATCTCGTTC
AACGAACAGG ACGGGCACTC CACCGCGATG ACCTTCCTGC TGACGGTCAG CGATCGCCAG
CACCTGGCCC AGATCATGCG AGGCCTGCGG CGCCTGCCGG ATGTGCTGCG TATCGCGCGC
CAGCGCGGTT AG
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| Protein sequence | MAAGQPAVPG AASPVPGDST RFLISDLCSE LESYLEPDEV EEVYRAYLLG AEAHEGQTRK
TGEPYIYHPL AVARTMAEMR MDHKAICAAI LHDVMEDTAT SKDRIHAEFG EEVAELVDGV
SKLTHLQFQS KAEAQAENFR KMMLAITRDI RVILIKLADR LHNMRTLGVM RPDKRRRIAK
ETLEIYAPIA QRLGMNAIRR ELEQLGFSAK HPWRAAVLER AVQRAGGNRR EPMKNIEQAI
CSRMEAAGIV GRISGREKSL YSIYRKMRDK HHSFEEVFDV FAIRIIVDDV DTCYRSLGVV
HNLYKPVPGR FKDYIAIPKS NGYQSLHTIL FGPQAIPIEV QIRSTEMDRV AESGIAAHWQ
YKAGGESART AQSRAREWLK DVLEIQNSVG NSIEFLENVK VDLFPDEVYT FTPEGDILVL
PRDATPIDFA YAVHSDVGNR CVAAKIDRQL APLSVRLQSG QTVEIVTAPG ARPNPAWLSF
VVTGKARSGI RHCLKSMQSD EARALGERLL EKALSALDTS LKQISPARLD QLLDAMQLQD
LDSLLVDIGL GNRMASLVAR QMVGKESAEA DNTTQTTLAV KGTEGLVLNY ARCCHPIPGD
PIIGQLSAGR GLVVHRESCR NVLHESRDRA DKTIALEWSH EPELQFTAAV RTRTANRRGA
LADMAAVIAD NGSNIEHISF NEQDGHSTAM TFLLTVSDRQ HLAQIMRGLR RLPDVLRIAR
QRG
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