| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1950 |
|---|
| Symbol | |
|---|
| ID | 8807724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2072579 |
|---|
| End bp | 2074384 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_003461177 |
|---|
| Protein GI | 289209111 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA CTCGCCTCAC CCGCAATTTT TCCATCATCG CGCACATCGA CCACGGCAAG
TCCACGCTGG CCGACCGCCT GATCCAGGGC TGCCACGGCC TGACCGAACG CGAGATGTCC
GAGCAGGTGC TGGACTCGAT GGACCTGGAG CGCGAGCGCG GAATCACCAT CAAGGCGCAA
AGCGTCTCGT TGTTCTACGA CGCCCAGGAT GGCCAGCGCT ATCAGCTGAA TTTCATCGAT
ACCCCGGGGC ATGTGGACTT TTCCTACGAG GTGTCGCGTT CGCTGTATGC CTGCGAGGGC
GCGCTGCTGG TCGTCGATGC CTCCCAGGGT GTGGAGGCGC AGAGCGTGGC CAACTGCTAT
ACCGCGATCG ACCAGGGGCT CGAGGTCGTC CCGGTGCTCA ACAAGATCGA CCTGCCGGCG
GCCGAGCCGG ACCGCGTGGC GGCAGAGATC GAGGACGTGA TCGGCATCGA GGCCACCGAC
GCCGTGCGGG TCTCGGCCAA GACCGGCGAG GGCATCGCCG AGCTGCTCGA GGAGATCGTG
CGTCGAATCC CGCCGCCGGA GGGGGACGCC GAGGCCTCGC CCAAGGCCCT GGTGATCGAC
TCCTGGTACG ACAACTACCT GGGCGTGGTG GCGCTGGTGC GGGTGAAGGC CGGGCGCTTT
TATGCGGGGC AGAAGATCAA GGCGATGTCG GTCGGGCGTG CCCACGAGGT CAGCCGAGTC
GGGGTATTCA CGCCCAAGCC GGTGGACCGC GAGACCCTGG AGGTGGGCGA GGTCGGCTAT
CTGATCGCGA CTATCAAGGA CATTTCCGGG GCCAAGGTGG GCGACACCTT CACCGACTTC
AACAACCCGG CCTCCGAGCC GGTGCCGGGC TTCCAGGAGG TCCAGCCGCG GGTGTTCGCC
GGGCTGTTCC CGGTCAGCGC GGATGACTTC AACGACCTGC GCGATGCGCT GGACAAGCTG
CGCCTGAACG ATGCCGCGCT GTCCTTCGAG CCGGAGACGT CGCAGGCGCT GGGCTTTGGC
TTTCGCTGCG GCTTCCTCGG CATGCTGCAC ATGGAGATCG TGCAGGAGCG CCTGGAGCGC
GAGTACGACC TCGACCTGAT TACCACCGCG CCCACGGTGG TCTACGAGGT GGAAAAGAGC
GACGGCGAGG TGGTGATGGT GCACAACCCA TCCGGGCTGC CGCCGAGCAA CGAGATCGCC
GAGATCCGCG AGCCGATTAT CGAGGCGAAC ATCCTCGTGC CGCAGGACTA CGTCGGCGCG
GTGATCACCC TGTGCATCGA AAAGCGCGGG GTGCAGACCA AGATGCAGTA CCTGGGGCGT
CAGGTGCAGC TGTCCTACGA GCTGCCGATG TCCGAGGTGA TGCTGGACTT CTTCGACCGG
CTGAAGTCCG CAACCCGTGG CTACGCCTCG TTCGACTACC AGCCGCGGCG CTTCCAGGCG
GCGCCACTGG TGCGCGTGGA TATCCTGATC AACGGCGAGC GAGTGGATGC CCTGTCCGGG
ATCGTGCATC GTGACCACGC GGAGTCGCGC GGTCGCGAAC TGACCGAGCG CATGGCCAAG
ATCATCCCGC GGCAGATGTA CGAGGTGGCG ATCCAGGCGG CGATCGGCTC GAAGATTATC
GCGCGCTCCA CGGTCAAGGC GATGCGCAAG AACGTCCTGG CCAAGTGCTA CGGGGGTGAC
GTCTCGCGCA AGCGCAAGCT GCTGGAGAAG CAGAAGGCCG GCAAGAAACG CATGAAGTCG
ATTGGCAAGG TGGATGTGCC GCAGGAGGCC TTCCTGGCGG TGCTGTCGGT CGGCGACGAC
AAATAA
|
|---|
| Protein sequence | MTETRLTRNF SIIAHIDHGK STLADRLIQG CHGLTEREMS EQVLDSMDLE RERGITIKAQ
SVSLFYDAQD GQRYQLNFID TPGHVDFSYE VSRSLYACEG ALLVVDASQG VEAQSVANCY
TAIDQGLEVV PVLNKIDLPA AEPDRVAAEI EDVIGIEATD AVRVSAKTGE GIAELLEEIV
RRIPPPEGDA EASPKALVID SWYDNYLGVV ALVRVKAGRF YAGQKIKAMS VGRAHEVSRV
GVFTPKPVDR ETLEVGEVGY LIATIKDISG AKVGDTFTDF NNPASEPVPG FQEVQPRVFA
GLFPVSADDF NDLRDALDKL RLNDAALSFE PETSQALGFG FRCGFLGMLH MEIVQERLER
EYDLDLITTA PTVVYEVEKS DGEVVMVHNP SGLPPSNEIA EIREPIIEAN ILVPQDYVGA
VITLCIEKRG VQTKMQYLGR QVQLSYELPM SEVMLDFFDR LKSATRGYAS FDYQPRRFQA
APLVRVDILI NGERVDALSG IVHRDHAESR GRELTERMAK IIPRQMYEVA IQAAIGSKII
ARSTVKAMRK NVLAKCYGGD VSRKRKLLEK QKAGKKRMKS IGKVDVPQEA FLAVLSVGDD
K
|
|---|
| |