| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1920 |
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| Symbol | |
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| ID | 8807693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2038418 |
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| End bp | 2041552 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003461147 |
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| Protein GI | 289209081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0960887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCT TCTTCATCGA CCGGCCGATC TTCTCCTCGG TCATCTCGTT CGTTATCGTG
TTGGCGGGGC TGGCGGCGCT GAGCGCGTTG CCGGTAGAGC AGTACCCGGA TGTGGTGCCA
CCGCAGGTCG TGGTCCAGGC CAACTATCCC GGTGCCAGTT CCGAAGTGCT GGCGGAATCG
GTCGCCGCGC CGCTGGAGCA GGAAATCAAC GGCGTGGACA ACATGATCTA CATGGAGTCC
ACCAGCACCG ATGCCGGCTC CCTGCAGATC GCCGTCTCGT TCGAGATGGG CACCGATCCG
GACCAGGCGG CCATCAACGT CAATAACCGG GTGCAGGCCG CCCTGCCGCG CCTGCCGCAG
GAGGTGCGGG ATCAGGGCGT GCGGGTGGAA GCGCGCTCCA CCAACATTCT GATGGTGCCG
GTGCTGAGCT CGCCGGATGG CCGCTACGAT TCGCTGTTCA TCAGCAATTA CGCGCTGCTC
AATGTGCTGG ACGAACTGGT CCGTCTGCCC GGTGTCGGCG ACGCCAGCCT GTTCGGCGCC
CAGGATTACT CCATGCGCGT GTGGCTGCGG CCGGACAAGC TCGCCCAGTT CGAGCTCACA
CCGTCCGATG TGACCGCCGC GATACGGGAG CAGAACGCCC AGTTCGCCGC AGGGCGCATC
GGGGCGGAGC CGGCACCGGA GGGGCAGGCC TTTACCTTCA CGGTGACCAC CGATGGGCAG
CTCGACAACG CCGAGGCCTT CGAGGACATC ATCCTGCGCT CCGGGTCCGA TGGCAGCACC
CTGCGGCTGG GGGATGTGGC AAGGGTCAGC CTGGGCGCCC AGAACTACGA GTTTTCCGCC
ACCTATAACG GTGAGCCAAC CGTGCCCCTG GGCGTCTTTC TGCAGCCCGG CGCCAACGCG
CTGGACACGG CCCGGGAGGT GCGGTCGGCC CTCGACGAGT TGTCCGAGCG TTTTCCGGAC
GGCCTGGAAT ACACGGTAGC CTACGACATC ACCGAGTTCG TGGAGATCTC GGTGCGGGAG
GTCTTCATCA CGCTGCTGAT CGCCGTGGCG CTGGTGGTGC TGGTGACCTT CCTGTTCCTG
CAGCACCTGC GGGCCACGCT GATCCCCGTG GCGGCCATTC CGGTGTCCCT GATCGGCACG
TTTGCCGGCA TGCAGGCGAT GGGCTTTTCG GTCAATCTGC TGACCCTGTT CGGCCTGGTG
CTGGCGATCG GCATTGTGGT CGACAACGCC ATCATCGTTA TGGAAAACGT GGAACGGCTG
ATGGCCGAAA AGGGCTTGAA GGCGCGCGAG GCGTCCATTG AAACCATGCA GCAGGTGGCC
GGGGCGGTGG TGGCCTCGAC CCTGGTGCTG GTGGCAGTGT TCGCGCCGGT GGCATTCCTG
GGAGGCCTTT CCGGGGAGTT GTACCGTCAG TTCGCGGTGA CCATCGCCGT GTCCGTGGTG
GTTTCCGGCG TGGTGGCGCT GACCTTGACG CCGGCCATGT GTGCCCTGCT GCTGGACAAG
CAGAAGCACA CGGTGTCCCG GCCGTTCGCC CTGTTCAATA GCGGCTTCAA TGCGCTGACC
CGTGGTTTCG TAGGAACGGT GGGCTGGCTG TTGCGCCATC GCACGGTGGG TGTGGCGCTG
TTTCTGGGTT TCTGCGCGAC GACGGTGTTC CTGCTGGACC GCCTGCCATC CGGTCTGGTG
CCGCAGGAAG ACCAGGGCGT CGCGCTGGTG GTGGGCCAGT TGCCGCCGGT ATCGGCTCTG
GGGCGCACGG AGCAGGTGCG GGACGAACTG ACGGACCGCC TCCGGGAGAT CGAGGAGATC
GACGAGTTCA CCGCGTTCGC CGGATTCGAC ATTATCGCCT CGTCCCTGCG TACCAACGCC
CTGGTCGGCT TTGCCAACCT GAGCGACTGG TCCGAGCGCC GAGCTCCGGA CCAGCATGCC
TCGGCGGTTG TGGGCAGGAT CATGGGTGTC GGAGCCGGGA TCCCGGAGGC CAATGTGTTC
GCCTTCGCGC CGCCGCCTAT TCAGGGCTTG TCACTGACCG GGGGGGTGGA AGGCTACCTT
CAGGTCCGCG GTCAGACCAC CACGGACGAA GTGGACGCAG CGGCCCAGCG GGTGGTGCAG
GCCGCCAATG AACGGCCCGA GCTGGTTAAT GTGCGGGCCA CGCTGGATAC CAACATGCCG
CGCTACAGCG CCACCGTGGA CCGGGAGAAG GCCCGCGCCA TCGGCGTGCC CATCAACACC
ATCTTCGAGG CCATGCAGAG CACCTTCGGC GCCTTTTATG TCAACGATTT CACTTACCAG
GGGCGTTTGT GGCGGGTGAA CGTGCAGTCC GAAGCGGAGT TCCGCAGTCG CGAAGAGGAC
CTCCGGCATG TGTTCGTGCG CTCGGATGCC GGGGAGATGG TGCCCGTGGA TTCCCTCGTG
AGCCTGGAGC GGGGCAGCGG CGCGGACATT ATCAACCGCT TCAATATCTA TCAGTCGGCG
CGCTTGCTTG CGGATGCGGC ACCGGGTTAC ACCACGGGCC AGGCCAAGGA GGCATTGGAA
GCCGTGGTGG CCGAGTTGGA CTCGGACGCC AACACCACCA TGGGCTGGAT TGGCGAGGCC
TACCAGCTGG ACGTTGCCGC CGGTGCCGCT GGCGCGGCGT TCGGTCTGGG GCTGCTGATG
GTGTTCCTGA TTCTGGCCGC CCAGTACGAG CGTCTGACCC TGCCCCTGGC GGTGGCCACC
GCCGTACCCT TCGGTGTGCT CGGCGCGGCC CTGGCAACCA TGCTGCGCGG CTTTCCCAAT
GACATCTACT TTCAGGTAGG GCTGCTGGTG CTGATCGGCC TGGCGGCGAA GAATGCCATC
CTGATCGTGG AGTTCGCCGC GCAGAACCGG CGCGAAGGCA TGAGTTCTAC CGATGCCGCC
ATGGCGGCGG CGCGGCAGCG TTTCCGTGCG ATCGTCATGA CCGCGATGAC CTTCATCATC
GGCACGCTGC CGCTGATGTT CGCCACCGGA GCCGGCGCGG CCAGTCGACA GGAGATCGGC
ACCGTGGTGG TGGGCGGCAT GATCGCGGCC AGCACCCTGG CGCTGCTGTT CGTGCCGTTG
TTCTACAAAT TGCTCGAGGA TCTGGTCACT TGGCGTCAGC AACGTCGCGA GAAGAAGGAG
GCCAGCCATG CGTAA
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| Protein sequence | MLRFFIDRPI FSSVISFVIV LAGLAALSAL PVEQYPDVVP PQVVVQANYP GASSEVLAES
VAAPLEQEIN GVDNMIYMES TSTDAGSLQI AVSFEMGTDP DQAAINVNNR VQAALPRLPQ
EVRDQGVRVE ARSTNILMVP VLSSPDGRYD SLFISNYALL NVLDELVRLP GVGDASLFGA
QDYSMRVWLR PDKLAQFELT PSDVTAAIRE QNAQFAAGRI GAEPAPEGQA FTFTVTTDGQ
LDNAEAFEDI ILRSGSDGST LRLGDVARVS LGAQNYEFSA TYNGEPTVPL GVFLQPGANA
LDTAREVRSA LDELSERFPD GLEYTVAYDI TEFVEISVRE VFITLLIAVA LVVLVTFLFL
QHLRATLIPV AAIPVSLIGT FAGMQAMGFS VNLLTLFGLV LAIGIVVDNA IIVMENVERL
MAEKGLKARE ASIETMQQVA GAVVASTLVL VAVFAPVAFL GGLSGELYRQ FAVTIAVSVV
VSGVVALTLT PAMCALLLDK QKHTVSRPFA LFNSGFNALT RGFVGTVGWL LRHRTVGVAL
FLGFCATTVF LLDRLPSGLV PQEDQGVALV VGQLPPVSAL GRTEQVRDEL TDRLREIEEI
DEFTAFAGFD IIASSLRTNA LVGFANLSDW SERRAPDQHA SAVVGRIMGV GAGIPEANVF
AFAPPPIQGL SLTGGVEGYL QVRGQTTTDE VDAAAQRVVQ AANERPELVN VRATLDTNMP
RYSATVDREK ARAIGVPINT IFEAMQSTFG AFYVNDFTYQ GRLWRVNVQS EAEFRSREED
LRHVFVRSDA GEMVPVDSLV SLERGSGADI INRFNIYQSA RLLADAAPGY TTGQAKEALE
AVVAELDSDA NTTMGWIGEA YQLDVAAGAA GAAFGLGLLM VFLILAAQYE RLTLPLAVAT
AVPFGVLGAA LATMLRGFPN DIYFQVGLLV LIGLAAKNAI LIVEFAAQNR REGMSSTDAA
MAAARQRFRA IVMTAMTFII GTLPLMFATG AGAASRQEIG TVVVGGMIAA STLALLFVPL
FYKLLEDLVT WRQQRREKKE ASHA
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