| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1900 |
|---|
| Symbol | |
|---|
| ID | 8807673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2015849 |
|---|
| End bp | 2016664 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003461127 |
|---|
| Protein GI | 289209061 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAC CGCAGATCAT CCCGCCCGCG AAGGCGGCTC ACGCCGAGAC GGGCTTTCGC
GTCCATCTGG CCGCCGGACC GGGCGACCTG GAGGCCGCTC AGCGCCTGCG CTACTCCGTG
TTCGCGGAGG AGATGGGCGC GCGGATTTCC GACGCCGAAG GCGAGCTGGA TGCCGATTAT
CTGGATCCCC ACTGCCATCA CCTCCTGGTA CGCGAGCCCC GCACCGGGGA GCTGGTCGCC
TGCACGCGCA TCCTGACCGA GGAGAGCGCG GCCGTTGCCG GTGGGTTTTA CTCACTGGCC
GAGTTCGAGC TGGGCCCGTT GATGAACCTG CCCGGCAAGA CGCTGGAGAT CGGGCGCACC
TGTGTGCGCG CGGATCAGCG TCAGGGTGCG GCGATCAATG CCCTTTGGTC CGGTCTCGCC
CGCTTTATGA CCGCGCGGCA GTATCAGTAC CTGATGGGCT GCGCCAGCCT TTCGCTGACC
GAACGGACCC CGGCCCAGCT TGCCTGGCTG CGCCTGTTTC ATCGCGGCCC GTCGCGTCTG
CGCGTCACAC CGCGCCGGCC GCTGCCCAAC TCCCTCAGTA TCTGGCACGG CACACCCTCG
CGCGCCGGCT TGCCATCGCT GCTCAAGGCC TACCTGCGCC TGGGTGCCCG TATCTGCGGC
GAGGCCTGTC ACGATCCCGA CTTCAATGTC GCCGATCTGC TGGTCCTGCT GGATGTCAGG
GACCTTCCGG ATCGCTACCA TCGGCACTTC CTGGGCGCGT CCGCGCCCAC TAGCCGAGGA
GCGACACATG ACGGGAAGCC TGCGGGCATC GGGTAG
|
|---|
| Protein sequence | MSAPQIIPPA KAAHAETGFR VHLAAGPGDL EAAQRLRYSV FAEEMGARIS DAEGELDADY
LDPHCHHLLV REPRTGELVA CTRILTEESA AVAGGFYSLA EFELGPLMNL PGKTLEIGRT
CVRADQRQGA AINALWSGLA RFMTARQYQY LMGCASLSLT ERTPAQLAWL RLFHRGPSRL
RVTPRRPLPN SLSIWHGTPS RAGLPSLLKA YLRLGARICG EACHDPDFNV ADLLVLLDVR
DLPDRYHRHF LGASAPTSRG ATHDGKPAGI G
|
|---|
| |